Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01355 ATGCATCGTctcacactcacactcacactcacactcCTCCTCTTGCTTCTCCCAAGGCTGGGCTCTTCGGCCCCCGCGGCGCTCCCCTCGGACGCGGTGTCGCTCTTGTCCTTCAAGCAGCAGGCCGACCAAGACAACAGACTCCTCTACGCGCTGAACGAGCGCTACGACTACTGCTCATGGCAGGGCGTGAAGTGCGCGCAGGGGAGAGTAGTCCGCTTCGTGGCCCAGTCCATGGGCCTGCGCGGCCCATTCCCCCCGGACACCCTCACCAAGCTGGACCAGCTCCGCGTCCTCAGCCTCCGCAACAACTCCCTCTTCGGGCCCATCCCTGACCTCTCCCCCCTCACCAACCTCAAGTCCCTCTTCCTCGACCGCAACGCCTTCTCCGGCGCCTTCCccccctccctcctcctcctccaccgcctcatcaccctctccctctccgccaacaacctctccggccccctccccccgcagctccctctcctcccccgcctcgtcgccctccgcctcGACTCCAACAACTTCTCCGGCACGCTCCCCTCCCTCAACCAAACCTCTCTAAAACTCCTCAACGTCTCCCACAACAACCTCACCGGCCCCATCCCCGTCACCTCCGCACTCGCCAAACTAAACCCCCAATCCTTCTCCCAAAACCCCGGCCTCTGCGGCGAGATTCTTCACAAACAATGCCCTCGCTCCCACTTCTTCGCCTCCACCGCGCCCTTGAGCCAGAGCGAACAGTCCCAGGGCATCGTCGTCGTTCCTTCTAATACCGCCAAACCCAAACACCACCCAAGAACCGGGTTGGTCCTCGGCCTCATTGTCGCGGTTGTTCTCGTCGCGGCTCTCTCTCTGACCGTTATTTCGCTGGTTAGGAGGAGGCGAGCGGTGGTGGTGGTTGTGGAACGAGCGGTTTCTGGCGAGGGTGAGAGCCAGAGGGAGGTGAAGGTGAGGAAGATGGAGGAGGCGCACAGGAGTGGGAGCTTGGTGTTCTGCTACGGGGAGGTGCAGCAGTATACGCTGGAGATGCTGATGAGGGCTTCGGCGGAGTTGTTGGGAAGGGGGAGTGTGGGGACCACTTACAAGGCGGTGATGGATTCGAGGCTCATTGTGACGGTGAAGAGGTTGGATGGAGGGAACAGTGAGGGGAGCGATGGGGAGCTGTTTGAGCGCCACATGGAGGTTGTGGGAAGGCTTCGCCACCCCAATTTGGTGCCTTTGAGAGCTTATTTTCAGGCTAAAGGAGAGAGGCTTGTTATATATGATTATCAACCCAATGGCAGCCTCTTCAACCTCGTTCACGGTTCAAGATCAGCTAGGGCCAAACCCTTGCATTGGACATCATGCTTGAAAATAGCCGAAGATGTGGCACATGGACTTGCTTATATCCATCAAGTTTCGTCTTTAATTCACGGCAACCTAAAATCCTCTAACGTCCTTCTCGGAGTGGACTTTGAAGCTTGTATTACGGACTACTGTTTGGCCTTCTTTGCAGATCCTTCATTCCCTGAAGATCCTGATTCTGCAGCATATAAAGCACCAGAGGCTCGTAAGTCTGGCCGCAGGGCCACTTCCAAGTCTGATGTGTATTCTTTTGGGGTGCTTCTGCTGGAGCTTTTGACGGGTAAACGTCCCTCCCAACACCCTTTTCTTGCACCAACGGATCTGCAAGATTGGGTTAGAGCAATGAGGGATGACGATGTTAGTGAAGATAACCGGCTAGAGATGCTGACGGAGGTTGCCAGTATTTGCAGTGCAACCTCGCCGGAGCAGAGGCCAGCAATGTGGCAAGTTCTTAAGATGATACAGGAAATAAAGGACAGTGTTACAATGAAGGATGCTGCACTTTCCGGACTCTCATAG 1869 0.5169 MHRLTLTLTLTLLLLLLPRLGSSAPAALPSDAVSLLSFKQQADQDNRLLYALNERYDYCSWQGVKCAQGRVVRFVAQSMGLRGPFPPDTLTKLDQLRVLSLRNNSLFGPIPDLSPLTNLKSLFLDRNAFSGAFPPSLLLLHRLITLSLSANNLSGPLPPQLPLLPRLVALRLDSNNFSGTLPSLNQTSLKLLNVSHNNLTGPIPVTSALAKLNPQSFSQNPGLCGEILHKQCPRSHFFASTAPLSQSEQSQGIVVVPSNTAKPKHHPRTGLVLGLIVAVVLVAALSLTVISLVRRRRAVVVVVERAVSGEGESQREVKVRKMEEAHRSGSLVFCYGEVQQYTLEMLMRASAELLGRGSVGTTYKAVMDSRLIVTVKRLDGGNSEGSDGELFERHMEVVGRLRHPNLVPLRAYFQAKGERLVIYDYQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQVSSLIHGNLKSSNVLLGVDFEACITDYCLAFFADPSFPEDPDSAAYKAPEARKSGRRATSKSDVYSFGVLLLELLTGKRPSQHPFLAPTDLQDWVRAMRDDDVSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQEIKDSVTMKDAALSGLS 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01355 622 SUPERFAMILY Protein kinase-like (PK-like) 352 608 IPR011009 -
Cca11g01355 622 ProSiteProfiles Protein kinase domain profile. 348 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01355 622 Gene3D Phosphorylase Kinase; domain 1 309 425 - -
Cca11g01355 622 Gene3D Transferase(Phosphotransferase) domain 1 427 618 - -
Cca11g01355 622 Pfam Protein kinase domain 351 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01355 622 Gene3D Ribonuclease Inhibitor 29 185 IPR032675 -
Cca11g01355 622 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 618 - -
Cca11g01355 622 ProSiteProfiles Leucine-rich repeat profile. 95 117 IPR001611 GO:0005515
Cca11g01355 622 Gene3D Ribonuclease Inhibitor 186 235 IPR032675 -
Cca11g01355 622 PANTHER LRR RECEPTOR-LIKE KINASE 13 618 - -
Cca11g01355 622 SUPERFAMILY L domain-like 28 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01355 Cca-Chr11 35076581 35080462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01355 28 615 Receptor kinase-like Gene Family AT3G50230 54.400 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Cca11g01355 Pkinase 1.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01355 - - gmx:100786526 919.072