Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01344 ATGGAAGCCGTCCAAGTCATCTCCACAACTACAATCCAAGCACCGAGTAACAATATTAACCATAACTCACCTCACAAAATCGATTTAACTCCGTGGGATCTCCAATTCCTCCCAATTGAAACCATTCAAAAAGGACTTCTTTTTCGCAACCAAAATCACACACCAAACCAAATTAAGAACCTCCAACATTCCCTTTCATCCACTCTTGCCTTTTTCCCACCCCTCGCGGGTCGTCTCGCCGTTTTCCAACATGATGACAACACTGTCTCGTCCCACATCGCATGCAACAACGCAGGTGTCCTTTTTGTCCACGCGGTTGCACCCAACACCACCGTTGCCGACATCCTTAAACCCAACTACGTTCCTCCCGTTGTCCACTCCTTCTTTCCACTTAACGGAGTCAAAAACTACGAAGGCACGTCACAGCCCTTGCTGGCAGTGCAAGTCACGGAGCTAGTTGACGGCGTCTTCATCGCCCTCACAATGAACCACGTGGTAGCCGACGGCAAGTCGTTTTGGCATTTCGTCAATTCCTGGGCTGAAATCTCACGTGGTTCACGTGAAATATCCAAACTCCCTTCTCTCGAACGTTGCTTTCTGATTCTGAGTGACACAGAGACCCCCATACGGTTTCCTTTCAGAAAGGAGGAAGAAAAACAACACTCCCAAAACCTCAATCCACGTGAGAGGGTGTTCCATTTCACGAAGGAAAAAATGGCGCAACTCAAATCGAAAGCCAACGCAGAGGCCAACACCGACAAAATATCTTCTCTGCAAGCGCTCTTAACTCTCCTTTGGCGCACTGTGACACGTTGCAAACGTGTTGACCCGCAAGAAAACATGCACTACGTGTTTTTCATTGGCGTTTGGTCGAGGATGGTTCCACCACTGGGAGGCTAG 900 0.4867 MEAVQVISTTTIQAPSNNINHNSPHKIDLTPWDLQFLPIETIQKGLLFRNQNHTPNQIKNLQHSLSSTLAFFPPLAGRLAVFQHDDNTVSSHIACNNAGVLFVHAVAPNTTVADILKPNYVPPVVHSFFPLNGVKNYEGTSQPLLAVQVTELVDGVFIALTMNHVVADGKSFWHFVNSWAEISRGSREISKLPSLERCFLILSDTETPIRFPFRKEEEKQHSQNLNPRERVFHFTKEKMAQLKSKANAEANTDKISSLQALLTLLWRTVTRCKRVDPQENMHYVFFIGVWSRMVPPLGG 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01344 299 Gene3D - 2 208 IPR023213 -
Cca11g01344 299 Gene3D - 211 299 IPR023213 -
Cca11g01344 299 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 297 - -
Cca11g01344 299 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 297 - -
Cca11g01344 299 Pfam Transferase family 4 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01344 Cca-Chr11 34675191 34676090 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01344 61 297 Monolignol Biosynthesis Gene Families AT5G48930 29.921 8.38e-21 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01344 - - gmx:100500257 444.891