Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01341 ATGGAAGCAGTCAAAGTCCTCTCCACAACCACAATAAAGGCATCAAACCACACTAACCATAACACACCTCACAAAATCGATTTAACTCCGTGGGATCTCCAATTCCTCCCGGTTGAAACCATTCAAAAAGGCCTTCTTTTTCGCAACCAAAGTCCCACACCGAACCAGATCCAGCACCTCCAACACTCCCTTTCATCCACTCTCGCTTTCTTCCCACCCCTCGCAGGTCGTCTCGCCATTCTCCAACATCCCGACAACACTGTCTCGTCCCACATCGAGTGCAACAACGAAGGTGTCCATTTCGTCCACGCCTCAGCACCCAACACCACCGTCGCCCACATCCTTCAACCCATCTACGTTCCTCCCATTGTCCACTCCTTCTTCCAACTCAACGGAGTTAAAAACCACCAAAGCACGTCACAACCAGTGCTGGCCGTGCAAGTCACGGAGTTACTTGACGGCATCTTCATCGGCTTCTCAATCAACCACGTTGTTGCTGACGGCAAGTCGTTTTGGCATTTCGTCAACTCCTACGCTGAAATATCACGTGGTTCTCCTAAAATATCCAAACTCCCTTCTTTTAACCGTTACTTTCTAGATGGCGTTGACCGCCCCATACGGTTTCCTTTCACAACGGAGGAAAAAAAACAACACTCCCCAAACCTCAAACCACAAACTCCAACCGAGAGGGTCTTCCACTTCACAAAGGAAAAAATCGCGCAACTCAAGTCAAAAGCCAACGCTGAGGCCCACACCGACAAGATATCTTCCCTGCAAGCGCTTTTAACTCACCTTTGGTGCTCTGTGGTTCGTTGCCAACATGTTGTGCCACAAGAAAAGGTGATTTATGTGCTATTGATTGGCGCTAGACCCAGAACGGTTCCACCACTCTCAGAGGAGTATTTTGGGAACGCAGCGATGGTTGGTTCTGTTACCATGAAAGCTGGGGAACTATTAGAGGGTGGGGTTGGTAAGGGTGCTTGGGAGATGAACAAGGTCATTTCTTTACACTCTCATGATACCATAAAGAACCACTATGAGTGTTGGGTGAGAACCCCGAAGCTGTTAAGGTTAGGTAGTTTGACTGGTCAGAATTCCTTGGTCACTAGCAGTTCTCCGAGGTTCAACATTTACGGTAATGACTTTGGGTGGGGAAAGCCTGTGGCAGTAAGAAGTGGCGGTGCAAATAAAATGTTCGGAAAGATTACTGTTTTTGCTGGCGCTGAAGAAGACTCTATTGACACTGAAGTGTGTCTTCCTCGTGAGATCTTGGAAGCAATGGAAAATTACCCTGACCTCATGGATGCCATTTCCAACTAG 1320 0.4803 MEAVKVLSTTTIKASNHTNHNTPHKIDLTPWDLQFLPVETIQKGLLFRNQSPTPNQIQHLQHSLSSTLAFFPPLAGRLAILQHPDNTVSSHIECNNEGVHFVHASAPNTTVAHILQPIYVPPIVHSFFQLNGVKNHQSTSQPVLAVQVTELLDGIFIGFSINHVVADGKSFWHFVNSYAEISRGSPKISKLPSFNRYFLDGVDRPIRFPFTTEEKKQHSPNLKPQTPTERVFHFTKEKIAQLKSKANAEAHTDKISSLQALLTHLWCSVVRCQHVVPQEKVIYVLLIGARPRTVPPLSEEYFGNAAMVGSVTMKAGELLEGGVGKGAWEMNKVISLHSHDTIKNHYECWVRTPKLLRLGSLTGQNSLVTSSSPRFNIYGNDFGWGKPVAVRSGGANKMFGKITVFAGAEEDSIDTEVCLPREILEAMENYPDLMDAISN 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01341 439 Pfam Transferase family 4 430 - -
Cca11g01341 439 Gene3D - 210 430 IPR023213 -
Cca11g01341 439 Gene3D - 2 205 IPR023213 -
Cca11g01341 439 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 437 - -
Cca11g01341 439 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01341 Cca-Chr11 34658095 34659708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01341 58 430 Monolignol Biosynthesis Gene Families AT5G48930 26.835 2.45e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01341 - - gmx:100500257 639.032