Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01340 ATGGCTAAGCAAGAGGATCAGAAAAACCATCTCTTCGGCATCAATGATCTCTCTCATAAGACCCTTCTTCAGAGCGATGCACTCCATCAATATATACTTGAAACGAGTGTGTATCCAAGAGAGCACGAGTGCTTGAAGGAGCTCCGCGAGATGACAGAAAAACACCCTCGGAACCGCATGGCTACACCACCCGACGAAGGACAACTTCTGAGTATGCTTCTTAAGCTCACGAATGCCAAGAACACATTGGAAATTGGTGTATACACTGGTTACTCTCTGCTCTCCACTGCCCTGGCTCTTCCCCATGATGGAAAGATCTTGGCTTTGGATGTGAACCGCGAATATTATGAGCTAGGATTGCCCATGATTCAAAAAGCTGGAGTGGCTCACAAGATCGACTTCAGAGAAGGACCTGCTCTTCCTCTTCTTGATGAGTTGCTTAAAGATGAAAATAACAAGGGAGCGTTTGATTTTGTTTTCGTGGATGCTGATAAGGACAACTACTTGAACTATCACAAGAGGGTAATTGAGCTTGTGAAGATTGGAGGTGTGATCGGATACGATAACACTCTATGGGGTGGATCTGTGGCGGCGCCACCTGATGCGCCGATGATGGATTACATTAAGCCTTTACGAGGTCACGTAATAGAGCTCAACAAGTATCTGGCTCAAGATTCCAGGATTGAGATTTGCCAGTTACCGGTGGGTGATGGGATTACCCTATGCCGCCGCATCATCTGA 741 0.4656 MAKQEDQKNHLFGINDLSHKTLLQSDALHQYILETSVYPREHECLKELREMTEKHPRNRMATPPDEGQLLSMLLKLTNAKNTLEIGVYTGYSLLSTALALPHDGKILALDVNREYYELGLPMIQKAGVAHKIDFREGPALPLLDELLKDENNKGAFDFVFVDADKDNYLNYHKRVIELVKIGGVIGYDNTLWGGSVAAPPDAPMMDYIKPLRGHVIELNKYLAQDSRIEICQLPVGDGITLCRRII 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01340 246 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 4 246 - -
Cca11g01340 246 CDD AdoMet_MTases 83 185 - -
Cca11g01340 246 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 244 IPR029063 -
Cca11g01340 246 Gene3D Vaccinia Virus protein VP39 12 246 IPR029063 -
Cca11g01340 246 Pfam O-methyltransferase 34 245 IPR002935 GO:0008171
Cca11g01340 246 PANTHER O-METHYLTRANSFERASE-RELATED 4 246 - -
Cca11g01340 246 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 21 245 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01340 Cca-Chr11 34618066 34620087 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01340 5 245 Monolignol Biosynthesis Gene Families AT4G34050 73.967 1.63e-131 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01340 K00588 - gmx:100305498 444.891