Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01332 atggctaccgggaaggccaccgccgaaaagagggattcgccccggggcccggagccaggaattcctggatacgactgggtcaagagcgagatggcgagggtccaaagcgtgtttcggacctttctagagGGAGGGAGGTGTGGCGGATGGTGTAACACGCACGTGAAACTCCTCGCCTTCGATCTCCTCTCTCTCACCCAATCTCCCTCCTTCTCCCGCAGAGGAATCCCTCTCTCACGCGTCGAAACCCTCGGCTCCGTTACCCTCCGCGACCTCAAGCCCGGCCTCTTTCTCTGCTTCGCTATCGACGACGGCACCGGCTGCGTCCCCTGCCTGCCCTGGCTCAACAACCGCCACTCCCCCTCCGTCACCCGCCACCACCGCCACGACCTCGCCGAGCACTTCGCCGCCCTCCTCACGCTCGGCTTCGTGGGTCGAGTCAGAGGCAGGCTCGGATGCTACAAGGGCGCCGTGCAGGTCACCGTCTCCGACGTCATGCTCGAGAGAGACCCCAACGCCGAGATCCTGCACCGCGTCAATTGCATCTTCTTGGCTCGCAACTGTTACAATCTTTTGCCTTCGCTGTCTTCTTCTTCTGCGccgccaccaccaccaccacAGATGGCGAGAGTGGTGTTGGCTTGGAGGATGATGGTGGTGGATCCGAAGGCGAAGCAGATAGCGGGGCAATTGGAAGGTGTTGTTGGGGCTTTGGAGAGTGGTGTTGGCTTGGAGGATGATGGTGGAGGTGGATCCGAAGGCGGAGCAGATAGAGGGACAATTGGAAGGCGGTGA 795 0.4969 MATGKATAEKRDSPRGPEPGIPGYDWVKSEMARVQSVFRTFLEGGRCGGWCNTHVKLLAFDLLSLTQSPSFSRRGIPLSRVETLGSVTLRDLKPGLFLCFAIDDGTGCVPCLPWLNNRHSPSVTRHHRHDLAEHFAALLTLGFVGRVRGRLGCYKGAVQVTVSDVMLERDPNAEILHRVNCIFLARNCYNLLPSLSSSSAPPPPPPQMARVVLAWRMMVVDPKAKQIAGQLEGVVGALESGVGLEDDGGGGSEGGADRGTIGRR 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01332 264 MobiDBLite consensus disorder prediction 1 24 - -
Cca11g01332 264 PANTHER CST COMPLEX SUBUNIT STN1 52 196 - -
Cca11g01332 264 SUPERFAMILY Nucleic acid-binding proteins 68 183 IPR012340 -
Cca11g01332 264 MobiDBLite consensus disorder prediction 242 264 - -
Cca11g01332 264 Gene3D - 50 194 IPR012340 -
Cca11g01332 264 PANTHER REPLICATION PROTEIN A-RELATED 52 196 IPR040260 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01332 Cca-Chr11 34381277 34384674 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01332 64 208 Core DNA Replication Machinery Family AT3G02920 28.082 2.37e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01332 K23312 - gmx:112997612 199.904