Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01317 ATGCTTAGGGTTTACCACGCTTACACGCAAGAAGCAAGCTCTCAACAGATTGCGCATTCTCTCTCAACTCTTTCGCAGACACGTTCTCTCTCAACCCTCTCGCAGGCTCTTCTCTTCACGACAACCCACTTTAAGGAACGCTGCTCTTGTGCGAGTTTCAAATTCACAAACGCTCCTAAAGGAGCTCTCCCAAAACGTGTTGGCATTCTTGCGCGAGGTGGCGATTTTTCTAGGGGTAACGGCACAGGTGGAGAAATTATTTACGGAGGCAAATTTGCAGATGAAAATTTCAAGCTAACACATGATGGACCTGGCTTTCTTTCTATGGCTAATAGTGGTCCTAACACAAATGGATCTTAG 360 0.4611 MLRVYHAYTQEASSQQIAHSLSTLSQTRSLSTLSQALLFTTTHFKERCSCASFKFTNAPKGALPKRVGILARGGDFSRGNGTGGEIIYGGKFADENFKLTHDGPGFLSMANSGPNTNGS 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01317 119 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 68 119 IPR002130 GO:0000413|GO:0003755
Cca11g01317 119 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 68 119 - -
Cca11g01317 119 SUPERFAMILY Cyclophilin-like 69 119 IPR029000 -
Cca11g01317 119 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 69 119 IPR002130 GO:0000413|GO:0003755
Cca11g01317 119 Gene3D - 40 119 IPR029000 -
Cca11g01317 119 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 68 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01317 Cca-Chr11 34007983 34011508 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01317 70 119 U-box Gene Family AT5G67530 58.824 3.54e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01317 K09566 - ghi:107959220 97.0561