Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01316 ATGGTTCCACAAACTTCATCTCTAAATTTCAGAGTAAGTACGAAGCCACCGGAGCTAGTAGTCCCAGCTACCCCCACACCCCGTGAGCTTAAGCTGCTATCTGACATAGATGACCAACTTTGCCTGCGTTTACAAATTCCTTTAGTATTTTTCTATGGTTACCGACCTTCAATGGCAGGGAAAGACCCTGTTCAAGTCATTAGACAAGCACTCGCCAAAACACTTGTGTTTTACTATCCCTTCGCAGGAAGGCTTAGGGAGAGTCCTAATGGCAAACTAATGGTTGATTGCAACGGAGAAGGTGTCATATTCGTCGAGGCTGATGCAGATGTCACAATTGAGCAGTTTGGTGACAATTTGTTGCCCCCATTCCCTTGTTTCGACAAGATCCTTTTTAACATTCCTGGTTCAGATGGAATCATAGACAGTCCAATCTTGCACCTTCAGGTTACACGTCTAAAATGTGGCGGTTTCATCTTTGCTCTCCGCTTTATTCATAATATGTGTGATGCAAGTGGAATTGGCCAATTCCTGAAGGCCTTGGCAGAAATAGCATGTGGTGGCCCAAATCCTTCTATTCTCCCTGTGTGGCATAGGGAGATGCTATGCGCAAGACACCCACCACGAGTTACATACACTCATGATGAATACCAAGAAGTACCACCCGATACAAGAAGCATGTACGAACCTAAATACTGTTCCTTCTTCTTTGGCCCCAAAGAGATTGCTTCTATTCGTGCTCTTCTTCCTCACCACGTTGCCACCAAATCCACATCCTTTGAGGTCTTAACCGCATGGCTTTGGCGTTCCTACACAACAGCATTAAAGTTGCAAAACCCTGATCAGGAGATCCACTTGCTGATTCCTGTGAACGCACGTTTTGGACATTGTAGGTTCAACCCTCCATTGCCCGATGGTTTTTACGGCAATGCTATGGTGCTTGTGTCGGAAGTTACCACAGTCGGAAAACTTTTGAGCCATCCCTTAGGGTATGCCTTGGAACTAGTGAAAAAGGCAAAGTATAAAGCAAATGAAGACTATGTGCGCTCCGTTGTAGACTTCGTAGCAAATAAAGAAAGAGCTTGCTTTCCTAGGTCAGGGTCTTTTGGCGTGACAGATCACACAAAGGCTGGTTTCACAGATGTGAACTTTGGGTGGGGCAATGCTTTGTATAATGGTGTGGTAGCCAAAGGTGGCATGGGGTATATGCTTGGAGCATGCGCCATTACTCCACACACCAACTCTAATGGAGAACAAGGTAGAGCGGTTCTGATGAGCGTGCCAGAATATGTTTTAGAGATGCTTGAGAAAGAGATCGGACAACATGCATGCACACACATGTTAATGTCGAATCTTTGA 1359 0.4533 MVPQTSSLNFRVSTKPPELVVPATPTPRELKLLSDIDDQLCLRLQIPLVFFYGYRPSMAGKDPVQVIRQALAKTLVFYYPFAGRLRESPNGKLMVDCNGEGVIFVEADADVTIEQFGDNLLPPFPCFDKILFNIPGSDGIIDSPILHLQVTRLKCGGFIFALRFIHNMCDASGIGQFLKALAEIACGGPNPSILPVWHREMLCARHPPRVTYTHDEYQEVPPDTRSMYEPKYCSFFFGPKEIASIRALLPHHVATKSTSFEVLTAWLWRSYTTALKLQNPDQEIHLLIPVNARFGHCRFNPPLPDGFYGNAMVLVSEVTTVGKLLSHPLGYALELVKKAKYKANEDYVRSVVDFVANKERACFPRSGSFGVTDHTKAGFTDVNFGWGNALYNGVVAKGGMGYMLGACAITPHTNSNGEQGRAVLMSVPEYVLEMLEKEIGQHACTHMLMSNL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01316 452 Pfam Transferase family 11 438 - -
Cca11g01316 452 Gene3D - 217 440 IPR023213 -
Cca11g01316 452 PANTHER ALCOHOL ACYLTRANSFERASE 14 443 - -
Cca11g01316 452 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 443 - -
Cca11g01316 452 Gene3D - 10 216 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01316 Cca-Chr11 33996035 33997943 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01316 8 425 Monolignol Biosynthesis Gene Families AT5G48930 31.954 1.87e-52 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01316 K19861 K13610 gmx:100795237 626.32