Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01315 ATGAAGTTTGTGGAACCATTTTATGCGTGTTATATGCAAGAGAAGCAAAGAAAAGATGTGGATGTGCAATGCTTGAATTTTGGAGATTGGGTTCCACAAACTTCATCTCTAAATTTCAGAGTAAGTACGAAGCCACCGGAGCTAGTAGTCCCAGCTACCCCCACACCCCGTGAGCTTAAGCTGCTATCTGACATAGATGACCAACTTTGCCTGCGTTTACAAATTCCTTTAGTATTTTTCTATGGTTACCGACCTTCAATGGCAGGGAAAGACCCTGTTCAAGTCATTAGACAAGCACTCGCCAAAACACTTGTGTTTTACTATCCCTTCGCAGGAAGGCTTAGGGAGAGTCCTAATGGCAAACTAATGGTTGATTGCAACGGAGAAGGTGTCATATTCGTCGAGGCTGATGCAGATGTCACAATTGAGCAGTTTGGTGACAATTTGTTGCCCCCATTCCCTTGTTTCGACAAGATCCTTTTTAACATTCCTGGTTCAGATGGAATCATAGACAGTCCAATCTTGCACCTTCAGGCATCCATGCTGGTAAGAACTCCACCACAAAGAAAGCAGCAACCGCCTTACCCACTATGGTATAGGCCCGAGGAAACATGCGATTATCACGCCGGGGCAGCAGGCCACTCCATAGAAAATTGCAATGCTTTGAAATCTCGTGTGCAAGAGCTTATCAATGTCGGGCAACTCAAGTTTGAGGCCAACACAACACAAATCAAGGAATGA 741 0.448 MKFVEPFYACYMQEKQRKDVDVQCLNFGDWVPQTSSLNFRVSTKPPELVVPATPTPRELKLLSDIDDQLCLRLQIPLVFFYGYRPSMAGKDPVQVIRQALAKTLVFYYPFAGRLRESPNGKLMVDCNGEGVIFVEADADVTIEQFGDNLLPPFPCFDKILFNIPGSDGIIDSPILHLQASMLVRTPPQRKQQPPYPLWYRPEETCDYHAGAAGHSIENCNALKSRVQELINVGQLKFEANTTQIKE 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01315 246 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 42 180 - -
Cca11g01315 246 Gene3D - 39 184 IPR023213 -
Cca11g01315 246 Pfam Transferase family 40 179 - -
Cca11g01315 246 PANTHER ALCOHOL ACYLTRANSFERASE 42 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01315 Cca-Chr11 33920245 33925125 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01315 37 182 Monolignol Biosynthesis Gene Families AT5G48930 39.189 4.16e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01315 - K19861 ccaj:109791488 372.474