Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01299 ATGATTCTTTCTTGGTTCCAAACCCCCATCATTCTCCTTCACTCTCCCTCCCAAGTCCCAACCGTGACCTCAATTCCCGTTTCCCTCACCTCCCGCCACGTGTCACTCCTCCATTCGCCTGTCACCACCGCTATCAAATTCAGATTCATCGCATACATACCGATAATGGAGATGGCTCAGCTGAAGACTAGAGCTCGAACTGCATTGCCCATGGAAGCTTCCGCAACTTCACCAAAGAGAAGAAAAATCGCCATcaacaccaacaccaacaccaacaccGTCACCGCTTCCTTCCTTCAACTCAAGAGTTTCAGTAACCACACAACCTCCACGGAGGAACGCTTCTCCGGCGAATCTCCGGCGTCTTGCTGCTCCAGCAACGGATCCTTCGATCAAAACCGAATCATCAACTTCTCAGATCTAGAGGTGGAGAGCGCGCAAGCTGAAACGTCGACGTGCAACTGCGGTGAACAACAACAAATGAGGAGAGAGATGAGTCTCTCGAGCGAGCTTCGAGTTACGAATTCGCAAGAGGTGGATTCCGCGGAGAAGAAGCTAACGATGCAGACCAAAGCCAAATCTCGCAGCGCTCTATCAACGCCGCAGAAAATGCCTACGGAATCGGAGCTCGAAGAATTCTTCGCCGCCGCCGAGAAAGACATTCAGAAACGCTTCTCAGACAAGTATAATTATGATATTGTGAAGGACGTGCCGTTGGAAGGACGATACGAGTGGGTTAAATTGAAGCCATAA 753 0.4861 MILSWFQTPIILLHSPSQVPTVTSIPVSLTSRHVSLLHSPVTTAIKFRFIAYIPIMEMAQLKTRARTALPMEASATSPKRRKIAINTNTNTNTVTASFLQLKSFSNHTTSTEERFSGESPASCCSSNGSFDQNRIINFSDLEVESAQAETSTCNCGEQQQMRREMSLSSELRVTNSQEVDSAEKKLTMQTKAKSRSALSTPQKMPTESELEEFFAAAEKDIQKRFSDKYNYDIVKDVPLEGRYEWVKLKP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01299 250 MobiDBLite consensus disorder prediction 191 206 - -
Cca11g01299 250 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 7 57 250 - -
Cca11g01299 250 MobiDBLite consensus disorder prediction 173 206 - -
Cca11g01299 250 Pfam Cyclin-dependent kinase inhibitor 204 248 IPR003175 GO:0004861|GO:0005634|GO:0051726
Cca11g01299 250 Gene3D p27 189 250 IPR044898 -
Cca11g01299 250 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 57 250 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01299 Cca-Chr11 33437464 33439213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01299 138 250 Core Cell Cycle Gene Families AT1G49620 43.860 4.24e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01299 - - ccaj:109818608 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01451 06 29421430 29423427 Cca11g01299 11 33437464 33439213 PCT