Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01284 ATGGGTCTCTGCAATTCAAAGCCTAGAGCAAATGCAGACCCCAATACCCACACCCACTTCACAGACACCAATGACAACGAACAAAACCCCACTCCCACCCCTAAAAAATCTCCTTTTTTTCCGTTCTACACTCCCAGCCCGGCCCCCCACTATTTCTCCGGCAAGTCTCCGGCGCCGACGACTCCCCGGCGCTTCTTCAAGCCGCCGTCGCCGGCGAAGCACATCCGGGCCGTGCTGGCCCGCCGCCACGGGTCCGTTAAGCCCAACGGAGCTACCATCCCGGAAGACGAGATGGTTGCTCTGGACAAGAACTTTGGATTCTCCAAACAGTTTGAGAACAAGTTTGAGGTTGGGGACGAGGTTGGACGGGGACACTTTGGTTACACTTGTGTTGCTAAGTTCCTTaagggcaatctcaaaggtcaacgtgtcgctgtcaaggtcatccccaaggccaagATGACCACTGCAATTGCTATTGAGGATGTGAGGAGGGAGGTGAAGATATTGAGGGCTTTGACCGGACATAAGAATCTGATTCAGTTCCACGATGCATATGAGGATAATGACAATGTCTATATAGTGATGGAGTTGTGCGAAGGAGGGGAGCTTTTGGACAGAATATTGTCGAGAGGTGGGAAATACACGGAGGAAGATGCAAAAGCTGTGATGTTTCAGATACTGAATGTTGTTGCATTTTGCCATCTACAGGGTGTTGTGCATCGCGATCTTAAACCTGAGAATTTCTTATTCACATCAAAAGATGAGAACTCTGAGCTGAAGGCCATTGACTTTGGATTGTCGGATTTTGTGAAACCAGATGAAAGGCTCAATGATATTGTTGGTAGTGCATACTATGTGGCTCCTGAAGTTCTGCATAGAGCTTACAGCACAGAGGCTGATGTGTGGAGTGTTGGTGTTATTGCATATATTTTACTATGTGGAAGCCGTCCATTTTGGGCAAGGACTGAATCAGGGATTTTTCGTGCCGTATTGAAAGCTGTTCCAAGTTTTGAGGAGCCTCCTTGGCCTTCTCTATCAGATGAGGCAAAGGATTTTGTTAAGAGACTTCTAAATAAAGATCCAAGGAAAAGAATGACTGCAGCACAGGCATTAGGTCATCCATGGATTAAAAATTATAAGGATGTAAAAGTACCCTTGGATATTCTAGTGTTCAAGCTCATGAAGGCATATATGCGCTCCTCCTCTCTACGAAAAGCAGCTTTAAGGGCTCTGTCTAAGACATTAGGTATTGAAGAGCTGCAGTATTTGAAGGAGCAGTTTGCACTTTTAGAGCCAAACAAAACTAACACTATTAGCTTGGAAAATATAAAAGCGGCCTTGATGAAGAATGCAACAGACGCTATGAAGGAATCACGCATTCCTGATTTTCTGGCATCACTTAATGCATTGCAATATAGAAGGATGGCTTTTGATGAGTTCTGTGCAGCTGCACTTAGTGTTCATCAACTTGAAGCACTTGACCGGTGGGAGCAACATGCACGCTGTGCTTATGAAATTTTTGAAAAGGATGGAAATAGGGCTATAGTCATTGAGGAACTAGCTTCGGAGCTTGGGCTTGGTCCATCTGTCCCTGTTCATGCTGTTCTACACGACTGGATTAGGCACACTGATGGAAAGTTGAGCTTCCTTGGTTTTGTTAAATTATTGCATGGTCCTTCTCGAAGTCTTGCGAAACCTCACTAG 1707 0.4411 MGLCNSKPRANADPNTHTHFTDTNDNEQNPTPTPKKSPFFPFYTPSPAPHYFSGKSPAPTTPRRFFKPPSPAKHIRAVLARRHGSVKPNGATIPEDEMVALDKNFGFSKQFENKFEVGDEVGRGHFGYTCVAKFLKGNLKGQRVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLIQFHDAYEDNDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAVMFQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSVGVIAYILLCGSRPFWARTESGIFRAVLKAVPSFEEPPWPSLSDEAKDFVKRLLNKDPRKRMTAAQALGHPWIKNYKDVKVPLDILVFKLMKAYMRSSSLRKAALRALSKTLGIEELQYLKEQFALLEPNKTNTISLENIKAALMKNATDAMKESRIPDFLASLNALQYRRMAFDEFCAAALSVHQLEALDRWEQHARCAYEIFEKDGNRAIVIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKPH 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01284 568 Gene3D Transferase(Phosphotransferase) domain 1 204 389 - -
Cca11g01284 568 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 563 - -
Cca11g01284 568 Gene3D - 417 486 - -
Cca11g01284 568 Pfam Protein kinase domain 115 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01284 568 MobiDBLite consensus disorder prediction 1 40 - -
Cca11g01284 568 CDD STKc_CAMK 114 376 - -
Cca11g01284 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Cca11g01284 568 ProSiteProfiles Protein kinase domain profile. 115 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01284 568 SUPERFAMILY EF-hand 405 559 IPR011992 -
Cca11g01284 568 Gene3D - 395 556 - -
Cca11g01284 568 MobiDBLite consensus disorder prediction 9 33 - -
Cca11g01284 568 SMART serkin_6 115 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01284 568 Gene3D Phosphorylase Kinase; domain 1 108 203 - -
Cca11g01284 568 SUPERFAMILY Protein kinase-like (PK-like) 112 403 IPR011009 -
Cca11g01284 568 ProSitePatterns Protein kinases ATP-binding region signature. 121 147 IPR017441 GO:0005524
Cca11g01284 568 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 27 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01284 Cca-Chr11 33009303 33013005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01284 1 568 EF-hand Containing Proteins AT3G50530 72.468 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Cca11g01284 Pkinase 1.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01284 K00924 - gmx:100803313 1039.25