Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01279 ATGGAGTGCATTTCCAATAAGCATTCTTCTGTTCCCTTCATTTTGCTAATACTCCTTTGTCCTCTAGTACGCTGCCAACTAAGTTATGACTTCTATTTGGCAACTTGTCCAACCCTCACACATGTTGTTCGAAGCACACTCGTTTTAGCTATGTTCCAAGAACCAAGAATTGCAGCTTCTCTCTTGCGCCTTCATTTCCATGATTGTTTTGCCAATGGATGTGATGGATCCGTTCTACTTGATGATACCGGCAATTTTACAGGGGAGAAAACTGCAGTGCCTAATCGAAATTCAATCAGAGGATTTGAGGTCATTGACGTAATCAAGTATAAAATAGAGCGTGAATGTCCATCCACCGTGTCATGTGCTGATATACTAGCTCTAGTAGCGAGAGAAGCTGTTAATCTTAGTATAGGACCATATTGGCAGCCAGCACTTCTTGGTCGTAGAGATGGCACAACAGCAAGCTTTAACGAGGCTAGTGAGTTGCCTTCACCCTTTGACACCCTTCAAAACAATACCAACAAGTTCATTTCCAAGGGTCTTGACATTAAGGATTTAGTAGTGCTCTCAGGAGCTCACACCATAGGCTTTGCTCATTGCTCTACATTCAAGCAAAGGCTCTTCAACTTTAGTGGCACTGGCAAACCCGATCCATCACTAGATCCTTCACTTTTACAGAATTTACAGAGACTATGTCCAGATAATAGTTCTGACAGCAATTTGGCTCCATTGGATGCAATCACTACAAACTTGTTTGACAACACGTATTACAAAAACATTGTGAATAAATTAGGGCTACTTCACACAGATGAGGCACTTATGAGTCATAACATAACTGCTTCATTGGTGATCAAGTATAGCAAGAGGCCAAGTGGTGAGTTATGCTTTTACAAGGACTTTGATGCGTCTCTTGAGAAAATGAGCCTCATAGGTGTACTTACAGGACAATTCGGGGAGATAAGGAAAAACTGCAGGGTGGTCAACTAG 990 0.4182 MECISNKHSSVPFILLILLCPLVRCQLSYDFYLATCPTLTHVVRSTLVLAMFQEPRIAASLLRLHFHDCFANGCDGSVLLDDTGNFTGEKTAVPNRNSIRGFEVIDVIKYKIERECPSTVSCADILALVAREAVNLSIGPYWQPALLGRRDGTTASFNEASELPSPFDTLQNNTNKFISKGLDIKDLVVLSGAHTIGFAHCSTFKQRLFNFSGTGKPDPSLDPSLLQNLQRLCPDNSSDSNLAPLDAITTNLFDNTYYKNIVNKLGLLHTDEALMSHNITASLVIKYSKRPSGELCFYKDFDASLEKMSLIGVLTGQFGEIRKNCRVVN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01279 329 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Cca11g01279 329 Gene3D - 30 329 - -
Cca11g01279 329 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 PANTHER PEROXIDASE 72-RELATED 13 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cca11g01279 329 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 SUPERFAMILY Heme-dependent peroxidases 26 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 Pfam Peroxidase 44 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 CDD secretory_peroxidase 26 328 IPR033905 GO:0004601|GO:0042744
Cca11g01279 329 ProSiteProfiles Plant heme peroxidase family profile. 26 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g01279 329 PANTHER PEROXIDASE 13 328 - -
Cca11g01279 329 Gene3D Peroxidase, domain 2 164 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01279 Cca-Chr11 32934557 32937133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01279 26 325 Peroxidase AT1G49570 56.908 7.88e-113 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01279 K00430 - gmx:100789642 493.041