Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01263 ATGTCGAGAAGCCCTTCATCGGAAATCGTCGTGACTGAAAATGCCCACACGTACTCGAGGAACCCTTTGTCGGAAATCGTCGTGACTGAAACTCATACAATAGTTGTTGCTCGGCCCAGTCAATCAGAAGGAGGAAGTGCATGTTCGAAAGGTTTGGGTGCATGTGGCCCCAGAGGAGATTGTGACAAGAGGTGTAAAGCTGAATTCAGTGATGGACAAGGTTCCTGTGAGTTAAACTTGTGCACTTGCTATTACAATTGTGCACCACCAGGTCCGCCAGCTCCTAAAAAGTGCAACATTAATCTTGGGGTTTGCACTGAGAATTGCAATGAAGATTGTTGTATCTCAAAATGTGCAACCCAATACAGACAGGGTCAAGGAAGATGTACCAACCTCATTGGTACACCATTCTCCTCATGTAGTTGTGATTATATATGCGGCTGA 444 0.455 MSRSPSSEIVVTENAHTYSRNPLSEIVVTETHTIVVARPSQSEGGSACSKGLGACGPRGDCDKRCKAEFSDGQGSCELNLCTCYYNCAPPGPPAPKKCNINLGVCTENCNEDCCISKCATQYRQGQGRCTNLIGTPFSSCSCDYICG 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01263 147 PANTHER DEFENSIN-LIKE PROTEIN 183 32 146 IPR039641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01263 Cca-Chr11 32517670 32522895 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01263 34 146 Plant Defensins Gene Families AT5G38330 39.831 2.74e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01263 - K24356 gsj:114386687 116.316