Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01245 ATGTTTCATCACAACACAAAGCTCTTCATGCTTCTCGCAATCTTCACGTTCTGTTCAGCAACCGCCAAAGCCAACACCTGCAACAGCACTTGCGGAGGACATTCCCTGCTATACCCTTTCGGCTTCTCTCCCGGCTGCCCAGTCAACCTCGTCTGCACCAAAGACAACAAAGTCAAAATCGGCGACTTCGAGGTTCAAAACGTAACCTCCGAGACCATTTTCGTTAGTGTTCCGGTGAAGTGCAGCCGCAGCGTGAGAATCATGGAGCCTCTTTTCGGAGAAAACTATGCGCCCACGTGGAACAATAATTTCCTGGTGCAGAATTGTTCGCGGAATCTGAGTGGGTGCGCTATTGAGGCGTGGGGTTTGGGCCGCGGCGTGGAGGGGTGTGACAAGGCAGGTGGAATCGTTACATGCTTCACGCAGTTGCAGAGGAAACGTAAGGGGGAGAATTTTCTGACGCTCGGAGATTGGAATGAGATTGAGTGTAGTTTCTTCTTCTCTGCTCTGGCTTTTGATAAGAGTAAAGCCAAAGGGCTTTCGCTTCAATTTCAGTTGTTGGAGTTGGGGTGGTGGCTTCCTGGGCCCTGTAATTGTTCCACCCATGCTTCCTGCGATAAGGTCAATCTTCCCACTAACAAACAAGGTTTCCGATGCCGCTGCAATCAGGGTTTCTACGGAGATGGATTTGCCAACGGCACCGGTTGCCGGAGAGTTTCTCATTGCAATATTTCAAAGGTCTGGTCTGGCGGATGTAGGAAAGCAATCAAAATTGGTGTCCTTGTTGGAGGGATCATAGCTGGAGCTATCCTGCTGTCTGCTCTGTCTCTTCTATGTTACTTTTCTAGGCGTCGTTCCTCTTGGCTGAGAAAACAAGTGACAGTAAAACGCCTATTACGAGAAGCTGCAGGAAGTTCTACTGTTCCTCTATATCCCTACAAAGAAATAGAAAGAGCCACAAGTTTTTTCTCTGACAAACATAGGCTGGGAACTGGGGCCTTTGGCACAGTTTATGCTGGACACCTTCACAATGATGAGTGGGTTGCTATAAAAAAGATCAAGTATAGAGACACCAACAGTGTTGACCAAGTCATGAATGAGATCAAGCTCCTGTCTTCAGTCAGCCACCCAAATTTAGTGCGCCTCCTAGGTTGCTGCATAGAAGGGGGAGAGCAGATACTTGTTTATGAGTACATGCCCAATGGAACACTATCTCAACATTTGCAAAGAGAGAGGGGTGGAGTACTTCCATGGACAAGGAGACTCACCATTGCTACTGAAACTGCTAATGCTATAGCATACCTCCATTCTGCAATTGATCCTCCAATTTATCACAGAGACATCAAATCCAGTAATATACTCTTGGACTACAACTGTGAATCAAAAGTAGCAGATTTTGGGCTTTCTAGGCTTGGCATGACAGAAACATCACATATCTCAACCGCCCCACAAGGGACCCCGGGCTATGTTGATCCCCAATACCACCAGAACTTCCACCTTTCTGATAAAAGTGACGTGTACAGTTTTGGAGTTGTTTTGGTAGAGATAATAACAGCAATGAAAGTGGTTGACTTTGCAAGACCTCAAAGTGAAATCAATTTGGCTGCACTTGCTGTTGATAGGATTAGGAGGGGTTGTATAGATGACATCATAGATCCCTTCCTTGAGCCACATAGAGATGCTTGGACACTCTATTCTCTTCACAAGGTGGCTGAGCTTGCTTTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACCATGATTGAAGTGGCTGAGGAGCTAGAACTTATCAGACGTAGCGGGTGGGCAACTATGGAGGAAACTGTATGCACAGCTTCATCTGTTGGGTCTGTGTGTTCATCGCCTCGTAATGGAAGTGCAAGTTCTCTGAGAGGTGTTAGTTTTGAGAGAGGTGCAGGACATGGGAATGAGACATTGATTGTTCAACACAAGACTGAGAGTTTTTTGCAATCAATTAAAGAGGTGAAGGACAGCTCCCCTGTGTCTGTGTATGATACTTGGTTAAGTGGAAATAGCTCACCTTCAACAAATAGCTTGTTAGGAAATGTAGCTCAGTGA 2082 0.4625 MFHHNTKLFMLLAIFTFCSATAKANTCNSTCGGHSLLYPFGFSPGCPVNLVCTKDNKVKIGDFEVQNVTSETIFVSVPVKCSRSVRIMEPLFGENYAPTWNNNFLVQNCSRNLSGCAIEAWGLGRGVEGCDKAGGIVTCFTQLQRKRKGENFLTLGDWNEIECSFFFSALAFDKSKAKGLSLQFQLLELGWWLPGPCNCSTHASCDKVNLPTNKQGFRCRCNQGFYGDGFANGTGCRRVSHCNISKVWSGGCRKAIKIGVLVGGIIAGAILLSALSLLCYFSRRRSSWLRKQVTVKRLLREAAGSSTVPLYPYKEIERATSFFSDKHRLGTGAFGTVYAGHLHNDEWVAIKKIKYRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEYMPNGTLSQHLQRERGGVLPWTRRLTIATETANAIAYLHSAIDPPIYHRDIKSSNILLDYNCESKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFARPQSEINLAALAVDRIRRGCIDDIIDPFLEPHRDAWTLYSLHKVAELAFRCLAFHSDMRPTMIEVAEELELIRRSGWATMEETVCTASSVGSVCSSPRNGSASSLRGVSFERGAGHGNETLIVQHKTESFLQSIKEVKDSSPVSVYDTWLSGNSSPSTNSLLGNVAQ 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01245 693 Gene3D Transferase(Phosphotransferase) domain 1 399 615 - -
Cca11g01245 693 Gene3D Phosphorylase Kinase; domain 1 284 398 - -
Cca11g01245 693 ProSiteProfiles Protein kinase domain profile. 323 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01245 693 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 12 674 - -
Cca11g01245 693 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 12 674 IPR045274 GO:0007166
Cca11g01245 693 SMART serkin_6 323 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01245 693 Pfam Protein tyrosine and serine/threonine kinase 326 594 IPR001245 GO:0004672|GO:0006468
Cca11g01245 693 SUPERFAMILY Protein kinase-like (PK-like) 304 598 IPR011009 -
Cca11g01245 693 ProSitePatterns Protein kinases ATP-binding region signature. 329 352 IPR017441 GO:0005524
Cca11g01245 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01245 Cca-Chr11 31853653 31858189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01245 1 693 Receptor kinase-like Gene Family AT2G23450 55.226 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Cca11g01245 PK_Tyr_Ser-Thr 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01245 - - gmx:100810861 1080.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01412 06 29002011 29006636 Cca11g01245 11 31853653 31858189 PCT