Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01209 ATGGGGGCTGGGGAAGAGAGCACACCTAAACCTTCTAAATCATCTTCATCAACTCAGGAGACACCAACAGTACCTGCTTATCCTGATTGGTCAGGCTCCGTGCAGGCCTATTATGCTCCTGGAGCCACTCCACCTCCCTTTTTTGCCTCAACTGTTGCTTCCCCAACTCCTCATCCCTATTTATGGGGAAGCCAGCATCCTTTGATGCCACCATATGGGACTCCAGTCCCATATCCAGCTTTATATCCTCCTGGGAGTATCTATGCTCATCCTAGCATGGCAGTGACTCCAAGTGCTGTCCAGCAAAGTACAGTAATTGAAGGGAAGGGGACTGATGGAAAAGAGCGGGACTCATCCAAAAAATTGAAAGGAACTTCTGCAAATACAGGTTCCAAGGCAGGAGAGAGTGGAAAGGCAGGCTCCGGTTCAGGCAATGATGGCATGTCACAAAGTGGCGAAAGTGGTTCAGAGGGTTCGTCAAATGCTAGTGAAGAGAATACTAACCAACAGGAATCAGCTACAAATAAGAAGGGAAGCTTTGAGCTGATGCTTGTTGATGGAGCCAATGCACAGAACAATTCTGCTGGTGCCATTTCTCAATCTTCTGTGCCTGGAAAGCCTGCTGTCTCAATGCCTGCAACTAATCTTAATATTGGAATGGACTTGTGGAATGCATCTTCTGGTGGTGCCGAAGCTGCAAAAATGAGACATAGTCAATCCGGTGCCCCAGGAGTTGCTATTGGTGAACAATGGATACAAGATGAACGTGAGCTGAAGAGACAGAAGAGGAAACAGTCGAATAGAGAGTCAGCCAGGAGGTCAAGATTACGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGAGTGGAGACGCTGGGAAGTGAGAATCGAACTCTCAGAGAAGAGCTTCAGAGACTTTCTGAAGAATGCGAGAAGCTTACATCTGAAAATAATTCTATCAAGGAAGAGTTGGAACGGGTGTGTGGGCCAGAAGCAGTTGCTAACCTTGAATAA 1014 0.4714 MGAGEESTPKPSKSSSSTQETPTVPAYPDWSGSVQAYYAPGATPPPFFASTVASPTPHPYLWGSQHPLMPPYGTPVPYPALYPPGSIYAHPSMAVTPSAVQQSTVIEGKGTDGKERDSSKKLKGTSANTGSKAGESGKAGSGSGNDGMSQSGESGSEGSSNASEENTNQQESATNKKGSFELMLVDGANAQNNSAGAISQSSVPGKPAVSMPATNLNIGMDLWNASSGGAEAAKMRHSQSGAPGVAIGEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVETLGSENRTLREELQRLSEECEKLTSENNSIKEELERVCGPEAVANLE 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01209 337 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Cca11g01209 337 Gene3D - 258 313 - -
Cca11g01209 337 SMART brlzneu 255 319 IPR004827 GO:0003700|GO:0006355
Cca11g01209 337 MobiDBLite consensus disorder prediction 1 30 - -
Cca11g01209 337 MobiDBLite consensus disorder prediction 228 280 - -
Cca11g01209 337 MobiDBLite consensus disorder prediction 45 81 - -
Cca11g01209 337 MobiDBLite consensus disorder prediction 96 213 - -
Cca11g01209 337 Coils Coil 268 323 - -
Cca11g01209 337 CDD bZIP_plant_GBF1 260 310 IPR045314 GO:0003700|GO:0006355
Cca11g01209 337 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 257 320 IPR004827 GO:0003700|GO:0006355
Cca11g01209 337 PANTHER G-BOX-BINDING FACTOR 1 1 337 - -
Cca11g01209 337 Pfam bZIP transcription factor 255 317 IPR004827 GO:0003700|GO:0006355
Cca11g01209 337 SUPERFAMILY Leucine zipper domain 258 314 IPR046347 GO:0003700|GO:0006355
Cca11g01209 337 MobiDBLite consensus disorder prediction 123 177 - -
Cca11g01209 337 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 262 277 IPR004827 GO:0003700|GO:0006355
Cca11g01209 337 MobiDBLite consensus disorder prediction 186 208 - -
Cca11g01209 337 MobiDBLite consensus disorder prediction 8 28 - -
Cca11g01209 337 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 337 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01209 1 337 bZIP Transcription Factor Family AT4G36730 55.457 1.07e-112 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca11g01209 MFMR 2.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01209 K09060 - gmx:778191 582.793