Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01195 ATGTCAGACTCACACCTGATCACTTTCTGTTTTCTTTCTTCCATCCTTGCTCTTGTTGTCATCTTCATTTTCACCAAAACAAAGAAACCAACCCTTAATCTCCCCCCTGGCCAAATGGGGTGGCCCCTTCTCGGTGAAACCTTTGGGTATTTGAAGCCTTTCTCTGCTGTTACACTAGGAGAATTTATGGAGAAGCGCATAGCAAGGTATGGTACAATTTACAAGTCACACTTGTTTGGTGATCCAGCCATAGTGTCAGCAGATGCAGGGCTGAATAAGTTCATATTGCAGAACGAAGGGAAGTTGTTTGAGATCAGTTATCCAAATAGTCTTGGGGCAATACTTGGGAAATGGTCTATGTTGGTCTTAGTAGGGGACATGCACAGAGACATGAGGAATATATCACTCAACTTTCTCAGTTATGCGAGGCTCCGAATAAATCTTTTCAAAGATATGGAGAGGCATGCCCTTCAAGTTATAACCTCGTGGAAGCAAAATTCTACATTCTCAGCTCAAGCCGAAGCAAAAAGGTTCACCTTCAATGTTATGGCGAAACATCTCATGAGCATGGATCCTGAGAATCTCGAGACAGAGCAATTGAAGAGAGAATATGTCTATTTCATGAAGGGTGCTATATCTCCTGTGCCTTTGAATTTTCCTGGAACAGCATACAGAAAAGCATTAAAGTCAAGGTCCAACATACTGAAGTTCATAGAGGCGAAAATGGAAGTAAGGGCTAAGAGAATGCAAAAGGGAAACGCAGGTTTGGAGGAAGATGGTGATCTTCTGAATTGGGTTTTGAAGCATTCAAAACTTACAAGTGAGCAAATACTTGACTTGATATTGAGTTTGCTCTTTGCTGGCCATGAAACATCATCGATAGCCATATCTCTGGCTATTTACTTCTTGTCAGGCTGTCCTCGAGCTATACAACAATTAAGGGAAGAGCACGTGGAAATAGTCACTTCTAAGAAGCAGACAGGGGAGCTTGAATTGACTTGGGATGATTACAAGAGAATGGAGTTTACTCACTGTGTTGTAAACGAAACACTTCGACTAGGAAATGTTGTGAGGTTCCTTCACAGGAAGGCTATTAAAGATGTTCGGTACAAAGGTTATGACATTCCACGTGGGTGGAAAGTCCTTCCGGTGATTTCAGCGGTGCATATGGATCCTTCACTTTTTGACCAACCCCAGCAATTCAATCCATGGAGATGGCAGGGTAATAATACAAGTGGAAGTTGCCAAAACGCAAGCAATAATAACTTCATGCCATTCGGAGGAGGATCAAGAATGTGTACGGGATCAGACTTAGCAAAACTTGAAATGTCTGTGTTCATGCACCATCTCATCCTTAACTACAACTGGGAACTCGTTGAAGCAGATCAACCTTTTGCATACCCTTTTGTCGATTTCCCCAAAGGTCTACCCATCAAAGTCCAAAACTACAAAAACCCTTCACAAACTCTCTCCTAA 1476 0.4221 MSDSHLITFCFLSSILALVVIFIFTKTKKPTLNLPPGQMGWPLLGETFGYLKPFSAVTLGEFMEKRIARYGTIYKSHLFGDPAIVSADAGLNKFILQNEGKLFEISYPNSLGAILGKWSMLVLVGDMHRDMRNISLNFLSYARLRINLFKDMERHALQVITSWKQNSTFSAQAEAKRFTFNVMAKHLMSMDPENLETEQLKREYVYFMKGAISPVPLNFPGTAYRKALKSRSNILKFIEAKMEVRAKRMQKGNAGLEEDGDLLNWVLKHSKLTSEQILDLILSLLFAGHETSSIAISLAIYFLSGCPRAIQQLREEHVEIVTSKKQTGELELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKAIKDVRYKGYDIPRGWKVLPVISAVHMDPSLFDQPQQFNPWRWQGNNTSGSCQNASNNNFMPFGGGSRMCTGSDLAKLEMSVFMHHLILNYNWELVEADQPFAYPFVDFPKGLPIKVQNYKNPSQTLS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01195 491 PANTHER CYTOCHROME P450 26 17 460 - -
Cca11g01195 491 Gene3D Cytochrome P450 23 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01195 491 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01195 491 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01195 491 PRINTS E-class P450 group I signature 296 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01195 491 PRINTS E-class P450 group I signature 344 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01195 491 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01195 491 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01195 491 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01195 491 PANTHER CYTOCHROME P450 90B1 17 460 - -
Cca11g01195 491 Pfam Cytochrome P450 35 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01195 491 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01195 491 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01195 491 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01195 491 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01195 491 SUPERFAMILY Cytochrome P450 32 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01195 Cca-Chr11 30097778 30102971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01195 26 410 Cytochrome P450 AT3G50660 67.901 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01195 K09587 - gmx:100800210 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01351 06 28344601 28349221 Cca11g01195 11 30097778 30102971 PCT