Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01155 ATGGCCCCTCTGCCAGCAGAAAACATCTTTACAATTATATTCCTTCCCTTAATATTTTCAGTATCCAAAGCTCGGCTTCATGCTCATTACTATGACCAAACATGTCCACAATTGGAAAAAATAATTTCAGAGACTGTTCTCAAAGCTTCTAAGCATGATCCAAAAGTCCCAGCTCGTATCTTGAGAATGTTCTTCCATGACTGTTTCATAAGGGGGTGTGATGCATCAATATTGCTGGACTCAACAGCCACTAACCAAGCTGAGAAAGATGGCCCTCCTAATCTCTCAGTTCGATGGATATATAGTATGTTGGATATTGATCTCTACATTTCCATAATGACCCCCCATGGAACATTAACATATCTTGAGGCAGTACGGGACTTGAAAGCTCAACTCAAGCCAGCTTCTATGCAGCCACACCCGCTACATTCGATTCCTCCGAAATTGTTCGTGAGTGATTCTATTGTTCTTGCGTCTCCTCTACCGTCGTTCGCGACGCTGCAAGATTCTTGGGTCTCTCCCACCGTTAGCGCCCAGGTTGTTCCTCTCTATGCTAGAAAGACTATTGGTGGATCACATGAAGGCATTGTTCCATTTCTATAG 603 0.4345 MAPLPAENIFTIIFLPLIFSVSKARLHAHYYDQTCPQLEKIISETVLKASKHDPKVPARILRMFFHDCFIRGCDASILLDSTATNQAEKDGPPNLSVRWIYSMLDIDLYISIMTPHGTLTYLEAVRDLKAQLKPASMQPHPLHSIPPKLFVSDSIVLASPLPSFATLQDSWVSPTVSAQVVPLYARKTIGGSHEGIVPFL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01155 200 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01155 200 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01155 200 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01155 200 ProSiteProfiles Plant heme peroxidase family profile. 25 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g01155 200 PANTHER PEROXIDASE 25-RELATED 8 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca11g01155 200 Pfam Peroxidase 45 105 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca11g01155 200 SUPERFAMILY Heme-dependent peroxidases 26 104 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca11g01155 200 Gene3D - 26 107 - -
Cca11g01155 200 PANTHER PEROXIDASE 66 8 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01155 Cca-Chr11 28758559 28768478 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01155 9 116 Peroxidase AT5G51890 64.220 3.09e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01155 K00430 - gmx:100799516 186.808