Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01139 ATGGAATGGTTTATTGGACTATGGACTCTGATGGGTATGCTTTTGTTTTGGTGGTTTCTTTGTGTgatgaagaaggagaatagtaataaggtcaagaagaaaaagaagGGGAAAGTTCCAAAAGGAAACAAAGGTTGGCCTTTACTTGGAGAGACCCTTGAGTTCATTGCTTGTGGCTACTCCTCCAACCCTGTCAGCTTCATGGAAAAACGAAAGTCTCTATATGGTAATGTATTTAAGACGAGCATTTTGGGAACTGGTGTGATTGTGTCGACAGACCCGGAAGTGAACAAGGTGATTCTGCAGAACCAGGGTAACATCTTCGTCCCTGCGTATCCAAAATCAGTTAGAGAACTAATGGGAGATTACTCCATTCTCCAAATGAATGGAAACATGCATAGGAAACTTCATTCACTCCTTGGAGGCTTCCTACGATCACCACAATTCAAAGCTCGAATCACCAAAGATGTCGAACACTCTGTTAAACAATGCTTTGCCTCTTGGACCCACCAACCAATACACGTTCAAGATCAAGTCAAAAAGATTACATTTACTATTTTGGTTAAAGTTCTGCTGAGCATGGGCCCCGGAGAAGATTTAGACTTCTTGAAGAGAGAATTTGAAGAGTTCATAAAAGGGTTGATTTGCTTACCCTTCAAGATTCCAGGAACAAGACTATATAAATCTTTGAAGGCTAAGGAAAGAATGATGAAGATAGTGCGGAGGGTAATAGAGGAAAGGAACAATGATATCCAAaataataataataataataaGGATTCAGGTGCAGCAAAGGATGTGGTGGATGTGCTCTTACGGGATAAGGGTGACACCAACTCTATCCCTAACATGTTGGAAAATATCTGCGAAAACATCATTGAAATGATGATTCCTGGGGAAGAGACTCTTCCTACGGCTATGACCATGGCTGTCAAGTTTCTCAGTGACTATCCCGTTGCTCTATCCAAATTAGTAGAGGAGAATATAGAATTGAAGAGACGGAAGAATAGTTCAGATGATTATGCATGGACTGACTACCTGTCACTGCAATTTACTCAAAATGTTATCAGCGAAACTCTAAGGATGGCAAATATTGTCAATGCCATTTGGAGAAAAGCAGTCAAAGACGTAGATATTAAAGGATACCTAATTCCTAAGGACTGGTGTGTTGTGGCATCTCTTACTTCTGTTCATTTGGATGGCATGAATTATGAAAACCCTTTTGAGTTTGATCCGTGGAGATGGGAGAATATTGGGGCTGGGGCTAATAACAATTGCTTTACACCATTTGGTGGTGGACAGAGATTATGCCCTGGCATAGAACTCTCAAGGCTAGAACTCTCAATTTTCCTTCACCATCTTGTTACAACTTACAGATGGGTCGCTGAGAAGGATGAAATTATATACTTTCCAACGGTTAAGATGAAGAGGAGGCTCCCAATTAGTGTAACAACATTAACATGA 1464 0.3934 MEWFIGLWTLMGMLLFWWFLCVMKKENSNKVKKKKKGKVPKGNKGWPLLGETLEFIACGYSSNPVSFMEKRKSLYGNVFKTSILGTGVIVSTDPEVNKVILQNQGNIFVPAYPKSVRELMGDYSILQMNGNMHRKLHSLLGGFLRSPQFKARITKDVEHSVKQCFASWTHQPIHVQDQVKKITFTILVKVLLSMGPGEDLDFLKREFEEFIKGLICLPFKIPGTRLYKSLKAKERMMKIVRRVIEERNNDIQNNNNNNKDSGAAKDVVDVLLRDKGDTNSIPNMLENICENIIEMMIPGEETLPTAMTMAVKFLSDYPVALSKLVEENIELKRRKNSSDDYAWTDYLSLQFTQNVISETLRMANIVNAIWRKAVKDVDIKGYLIPKDWCVVASLTSVHLDGMNYENPFEFDPWRWENIGAGANNNCFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYRWVAEKDEIIYFPTVKMKRRLPISVTTLT 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01139 487 Gene3D Cytochrome P450 28 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01139 487 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01139 487 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01139 487 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01139 487 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01139 487 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01139 487 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01139 487 PANTHER CYTOCHROME P450 26 6 483 - -
Cca11g01139 487 SUPERFAMILY Cytochrome P450 35 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01139 487 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01139 487 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01139 487 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01139 487 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01139 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Cca11g01139 487 PANTHER CYTOCHROME P450 FAMILY BRASSINOSTEROID OXIDASE 6 483 - -
Cca11g01139 487 Pfam Cytochrome P450 40 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01139 Cca-Chr11 28024682 28031386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01139 24 459 Cytochrome P450 AT3G13730 51.591 2.24e-162 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01139 K12637 - gmx:100812489 846.269