Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01137 ATGGACATTGTAGAAGAGAACGTAAGAGAGTTGAGGCAATACTTCAAAACTGGAAAAACCAAAAGTGTGACATGGAGGAAAAACCAGCTCACAGCTCTTCTAGACCTTGTTCATGAGAATGAAGAAGCTATATTTAAGGCCCTCCACCAAGATCTTGGAAAGCACCCTGTTGAGGCTTATCGTGATGAGATTGGAGGGGTTGAAAAATCAGCCAACAACTCTTTGAGCTGCGTTGAGAAATGGATGGCCCCTAAAAAGGCAGATTATTCTATTTTCTTTTTTAATATTCCTATGCTTTTCTTCCCAGCTAAAGGAGAAGTGTTGTCAGAACCACTTGGTGTGGTTCTCATATTTTCTTCTTGGAACTTCCCAATCATGCTGGCATTGGATCCATTAATTGGAGCAATATCTGCTGGAAATGTTGTAGTCATAAAACCTTCAGAGCAAGCTCCAGCATGCTCTTCTTTTCTTGCTAATACCATTCCTCGGTACTTGGACTCTAATGCCATCAAGGTGATTGAGGGAGGAGCAGATGTCTGTCAACAACTGCTACTACAAAAATGGGACAAAATATTCTTCACTGGAAGTCCACATGTAGCAAGCATAGTCATGTCTGCTGCTGCAAAGAATTTAACTCCTGTTACTCTGGAGTTGGGTGGAAAATGCCCTGCCATACTTGGTTCCCTTCCCAATCCTTCAGATTTTAAGTTGGCAGTGAAGAGAATTGTAGGAGGAAAGTGGGGACCTTGCAGTGGACAGGCTTGCATAGGAATAGACTATTTGCTTGTTGAGGAGAAATTCTCATCTGCTCTGATAGAACTATTAAAGAAGATAATCAGAAGATTTTATGGAGAAAACCCAGGAGTCAATGTTGATGAAGAAAAGTTGTTCATTGAACCTACAATATTGTTAGATCCTCCTCTAGATTCTCAGATAATGACAGAAGAAATATTTGGCCCACTGCTTCCTATAATCACAATTGATAAAATTCAGGGAAGTATTGAATTTATCAATGCAAGGCCAAAACCTCTTGCAATTTATGCCTTCACTAAAGATGAAACTTTCAAGAGACAGATTATATCAGAAACATCCTCAGGAAGTGTCTTATTTAATGACACAATGGTTCAATTTTTATGTGATACGCTACCATTTGGAGGTGTTGGCCAGAGTGGTTTTGGGAGGTACCATGGGAAGTACTCCTTTGACACTTTTAGCCATGAAAAAGCTATAATGCATAGAAACCTGCTACTTGAAATTGAACCAAGGTACCCTCCTTGGAGTAAGTTCAAGCTAGAGTTTATCAGATTGGCATACAAGCTGAACTACTTTGGATTATTATTGCACATGCTGGGCTTCAAACTGGGTTTGATAAAACACACCTAG 1383 0.3991 MDIVEENVRELRQYFKTGKTKSVTWRKNQLTALLDLVHENEEAIFKALHQDLGKHPVEAYRDEIGGVEKSANNSLSCVEKWMAPKKADYSIFFFNIPMLFFPAKGEVLSEPLGVVLIFSSWNFPIMLALDPLIGAISAGNVVVIKPSEQAPACSSFLANTIPRYLDSNAIKVIEGGADVCQQLLLQKWDKIFFTGSPHVASIVMSAAAKNLTPVTLELGGKCPAILGSLPNPSDFKLAVKRIVGGKWGPCSGQACIGIDYLLVEEKFSSALIELLKKIIRRFYGENPGVNVDEEKLFIEPTILLDPPLDSQIMTEEIFGPLLPIITIDKIQGSIEFINARPKPLAIYAFTKDETFKRQIISETSSGSVLFNDTMVQFLCDTLPFGGVGQSGFGRYHGKYSFDTFSHEKAIMHRNLLLEIEPRYPPWSKFKLEFIRLAYKLNYFGLLLHMLGFKLGLIKHT 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01137 460 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 218 IPR016162 GO:0016491
Cca11g01137 460 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 391 405 IPR016162 GO:0016491
Cca11g01137 460 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 290 390 IPR016163 GO:0016620
Cca11g01137 460 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 221 288 IPR016163 GO:0016620
Cca11g01137 460 PANTHER ALDEHYDE DEHYDROGENASE 288 453 IPR012394 GO:0006081
Cca11g01137 460 PIRSF ALDH 1 290 IPR012394 GO:0006081
Cca11g01137 460 PIRSF ALDH 286 451 IPR012394 GO:0006081
Cca11g01137 460 PANTHER ALDEHYDE DEHYDROGENASE 6 285 IPR012394 GO:0006081
Cca11g01137 460 SUPERFAMILY ALDH-like 4 425 IPR016161 GO:0016491
Cca11g01137 460 Pfam Aldehyde dehydrogenase family 290 409 IPR015590 GO:0016491
Cca11g01137 460 Pfam Aldehyde dehydrogenase family 4 281 IPR015590 GO:0016491
Cca11g01137 460 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER F1 6 285 - -
Cca11g01137 460 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER F1 288 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01137 Cca-Chr11 27960181 27963986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01137 2 453 Aldehyde Dehydrogenase Gene Family AT4G36250 56.701 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01137 K00128 - gmx:100808513 798.89