Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01132 ATGGAAGAGGCAGAGGAGGAGCAACGTCGTCGTTTAAAGCTCGAAGAGGCCCTTGAAATCCACTCCCTCAGACGCATCATTAGTGCTTGCCTCAAAGGGCGCGATAAATCGAAGCTTCCACCTGCCCATAAGatggcatcctcaagcaagcgtcctcgctcggatcaacctgagaacaattacctctctagaagacccctgtgtcgagcgcaaggagctgtggaagggactcccggtgcttgggaccgttcatgtAGTGAGGTTGCAGCTGGAAGTATAAATCTTAATGGAACTCTTATAGTGGAGGTGCGGAGACCAGGTGGCGAGACTGTTATGGGAGACATTGTTCGCATAGTTGAAGAGGCACAAAGTAGGGAAGCTCTTGTACAGCGATTGGCTGATAAGGTTTTCTTGTGA 417 0.3429 MEEAEEEQRRRLKLEEALEIHSLRRIISACLKGRDKSKLPPAHKMASSSKRPRSDQPENNYLSRRPLCRAQGAVEGTPGAWDRSCSEVAAGSINLNGTLIVEVRRPGGETVMGDIVRIVEEAQSREALVQRLADKVFL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01132 138 Gene3D - 42 123 - -
Cca11g01132 138 Pfam E1-E2 ATPase 87 136 - -
Cca11g01132 138 Coils Coil 4 24 - -
Cca11g01132 138 MobiDBLite consensus disorder prediction 34 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01132 Cca-Chr11 27832094 27842346 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01132 83 136 Primary Pumps ATPases AT1G63440 46.296 8.60e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01132 K17686 - mnt:21400210 89.7373