Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01130 ATGGCTCTCTTGTCCATCATCCCACTAATAATGCTTCTTCTAGTTTCACTGTCTCTACTCCGAAGAACCAAACCATATCCACCGGGACCAAAAGCCTTACCCATCATCGCCAACATGCTAATCATGAAGCACCTAACCCACAAGGGCCTCGCCCACCTCGCAAACAAATACGGCGGCGTTTTCCACCTCCGTATGGGCTTCCTCCACATGGTCGCCATTTCAAACACCAATATGGCCCGTCAAGTGCTCCAAGTTCAAGACAACATCTTCTCAAACCGCCCCGCAACCATCGCCATCAGGTACTACGTTAGTCTACAAATACAGATCAACATAAACACTTATCTTTGA 348 0.4799 MALLSIIPLIMLLLVSLSLLRRTKPYPPGPKALPIIANMLIMKHLTHKGLAHLANKYGGVFHLRMGFLHMVAISNTNMARQVLQVQDNIFSNRPATIAIRYYVSLQIQININTYL 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01130 115 Pfam Cytochrome P450 27 96 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01130 115 PANTHER OS04G0539300 PROTEIN 4 101 - -
Cca11g01130 115 Gene3D Cytochrome P450 17 111 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01130 115 PANTHER CYTOCHROME P450 FAMILY 1 4 101 - -
Cca11g01130 115 PRINTS E-class P450 group I signature 78 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01130 115 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01130 115 SUPERFAMILY Cytochrome P450 20 102 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01130 Cca-Chr11 27756487 27756834 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01130 24 101 Monolignol Biosynthesis Gene Families AT5G04330 62.821 1.83e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01130 K09755 - tcc:18610818 136.732