Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01129 ATGTCGTTTGCGCACTACGGGTCCACGTGGCGTTGCATGCGGAAACTGTGCGTGGTGAAGCTCTTGAGCCGCCACCGCATCGAGTCGTGGCGTTGCGTGAGGGACGAGGTGCGCAACGTCGTTTGCGCCTTGGGGTACCGCACCGGCGAGAGCGTGAACATTAGGGACACAGTGTTCAACCTGACAAAGAACATCGTTTACCGCGCCGCGTTTGGGTCGCGGTTGGAGGAAGGAGAGAACGAGTTCTTTCGGATTCTTCAGGAGTTTTCCAAGCTCTTCGGGGCTTTCAACGTCGCTGACTTCCTTCCCTTTCTCGCGTGGCTTGACCCCCACGGTTTCAACGCAAGGCTCGCCAAGGCTCGTGCGGCGTTGGACGCCTTCATCGACATCATCATTCACCAACACGTGCGGAAGAAGAGCCATGGTGCGGTGCGATTCACCAAGGATAATATCCGAGGCCTCATCATGGATGTGATGTTTGGGGGGACAGAGACAGTGGCATTGGCGATAGAGTGGGTTATGGCGGAGCCAATGAGAAACCCTTCAGACATGAAGCTCGTGCAGGAAGAACTCGCGCACGTGGTGGGCCTTCACCGCCACGTGGAGGATTCCGACATCGACCACCTCAGCCACCTCAAATGCGCCATCAAGGAGACGCTGCGCCTCCACCCGCCGACCCCGTTGCACCTCCACGAGACGGCGGAGGACGCCACCTTCGCCGGGTACTTCATCCCAAAGAAATCGCGCGTGCTGATCAACACGTGGGCCATTGCTGTACCCAGGAAGCGCGTGATGTTCCCACTCTAA 807 0.5836 MSFAHYGSTWRCMRKLCVVKLLSRHRIESWRCVRDEVRNVVCALGYRTGESVNIRDTVFNLTKNIVYRAAFGSRLEEGENEFFRILQEFSKLFGAFNVADFLPFLAWLDPHGFNARLAKARAALDAFIDIIIHQHVRKKSHGAVRFTKDNIRGLIMDVMFGGTETVALAIEWVMAEPMRNPSDMKLVQEELAHVVGLHRHVEDSDIDHLSHLKCAIKETLRLHPPTPLHLHETAEDATFAGYFIPKKSRVLINTWAIAVPRKRVMFPL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01129 268 Pfam Cytochrome P450 3 257 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01129 268 Gene3D Cytochrome P450 1 260 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01129 268 SUPERFAMILY Cytochrome P450 3 258 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01129 268 PANTHER CYTOCHROME P450 84A1-RELATED 143 258 - -
Cca11g01129 268 PANTHER CYTOCHROME P450 84A1-RELATED 1 140 - -
Cca11g01129 268 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 143 258 - -
Cca11g01129 268 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01129 Cca-Chr11 27748912 27749905 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01129 1 258 Monolignol Biosynthesis Gene Families AT4G36220 53.741 2.74e-112 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01129 K09755 - gmx:100793538 328.561