Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01127 ATGAGCTCCTTTGCAATCATGATTTTTGTCTTCCGAGGGAGTAGGGGAGATATTGAAAGTGGCTTTCCAGAATATGTTCCTGAAAGAACCTTGATGATATGCTTAATATGTGTGAATGTCAATGAAGAAAGTAATTGTTGGCACATATCATTTCAACTCTGGGTTGTACTGGCTATCTTTGTGATGGCTACGAGTCTAAGGATGTATGCAACTTGTCAACAGCTTCAAGCACAGGCCAGGGCTCATGCTGCAGCAGCCTTTGGGTTGCTTGTACATACTGAACTCCGTCTTCACATGCCACCATCAATTGCAATTGCAACCAGAGGAAGATTGTAG 336 0.4286 MSSFAIMIFVFRGSRGDIESGFPEYVPERTLMICLICVNVNEESNCWHISFQLWVVLAIFVMATSLRMYATCQQLQAQARAHAAAAFGLLVHTELRLHMPPSIAIATRGRL 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01127 111 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 7 111 - -
Cca11g01127 111 PANTHER TARGET OF ERK KINASE MPK-1 7 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01127 Cca-Chr11 27598516 27599206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01127 7 111 C3H Transcription Factor Family AT3G55530 55.738 2.81e-27 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01127 K16283 - gmx:100805406 129.028