Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01126 ATGAACATGCTGGAGCAACTCACGCACAGGGGATTGGCAACCCTGGCCAAGCAATACGGCGGCGTTTTCCACCTCCGCATCGGCTTCCTCCACATGGTTACCATTTCAGACGCCGAAGCCGCGCGTCAAGTGCTCCAACTCCAAGACAACATCTTCTCAAACCGCCCCGCATCCATCGCCATCAGGTACCTGACCTATGACCGCGCCGACATGGCCTTCGCGCACTACGGTCCGTTCTGGCGGCAGATGCGGAAGATCTGCGTGATGAAGCTCTTCAGCCGGAAGCGAGCGGAGTCGTGGAACTCCGTCAGGGACGAAGTGGACGCCGTCGTGCGCGCCGTCGCGGGCAGCCTCGGGAGCGCCGTGAACGTGGGGGAACTCGTTTTCAACCTGACTAAAAACATCATCTACCGCGCAGCGTTCGGGTCTAGCTCCCAAGAGGGGCAAGACGAGTTCATTTCGATTCTTCAGGAGTTCTCGAAGCTCTTCGGAGCCTTCAATATTGCCGACTTTGTTCCCTTCCTCGGGTGGCTGGACCCGCAAGGCCTCAACCAGAGGCTGGTGGAGGCACGTGCCACCTTGGATAGCTTCATAGACAAGATCATTGATGAACACGTGGAGAAGAAGAGGAGTGGCAACGGGAACTCCGATGATGAAAGTGACATGGTGGATGAGTTGCTCAATTTTTACAGTGAGGAGGCCAAGCTTAATAATCATGAGTTGGAAGACTTGCAGAACTCCATCAGACTCACCAAGGATAATATCAAAGCCATCATCATGGACGTGATGTTCGGAGGGACCGAAACGGTGGCATCGGGGATCGAGTGGGCGATGGCGGAGCTAATGCGGAGCCCGGAAGACCTGCGGCGCGTGCAGAGAGAGCTCGCCGACGTGGTGGGGCTGGAGCGGCGCGTGGAGGAAACCCACATGGAAAAGCTGGTCTACCTTAAATGCGTGGTGAAGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC 1319 0.4162 MNMLEQLTHRGLATLAKQYGGVFHLRIGFLHMVTISDAEAARQVLQLQDNIFSNRPASIAIRYLTYDRADMAFAHYGPFWRQMRKICVMKLFSRKRAESWNSVRDEVDAVVRAVAGSLGSAVNVGELVFNLTKNIIYRAAFGSSSQEGQDEFISILQEFSKLFGAFNIADFVPFLGWLDPQGLNQRLVEARATLDSFIDKIIDEHVEKKRSGNGNSDDESDMVDELLNFYSEEAKLNNHELEDLQNSIRLTKDNIKAIIMDVMFGGTETVASGIEWAMAELMRSPEDLRRVQRELADVVGLERRVEETHMEKLVYLKCVVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01126 439 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 1 322 - -
Cca11g01126 439 Gene3D Cytochrome P450 1 322 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01126 439 PRINTS E-class P450 group I signature 274 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01126 439 PRINTS E-class P450 group I signature 254 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01126 439 PRINTS E-class P450 group I signature 131 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01126 439 PRINTS E-class P450 group I signature 16 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01126 439 PRINTS E-class P450 group I signature 40 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01126 439 Coils Coil 320 321 - -
Cca11g01126 439 PANTHER CYTOCHROME P450 84A1-RELATED 1 322 - -
Cca11g01126 439 Pfam Cytochrome P450 9 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01126 439 SUPERFAMILY Cytochrome P450 7 321 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01126 439 Coils Coil 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01126 Cca-Chr11 27564213 27567669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01126 1 321 Monolignol Biosynthesis Gene Families AT4G36220 71.605 1.14e-169 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01126 K09755 - gmx:100807448 535.413