Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01125 GAGGCGGCGGTGTGCGGGTACCACGTGCCGAAGGGGTCGCGCGTGATGATAAACGCGTGGGCGATAGGGCGTGACGGGAACTCGTGGGAGGACCCGGATGCGTTCAAGCCCTCGCGGTTCCTTGAGCCGCACGTGCCGGATTTCAAAGGGAGCAACTTCGAGTTCATTCCGTTCGGGTCGGGTCGGAGGTCCTGCCCCGGAATGCAACTGGGTCTTTACACGCTTGAACTTGCCGTGGCGCACTTGCTTCACTGCTTCACGTGGGAGTTACCCGATGGGATGAAACCCAGCGAGTTGGACACGAGTGACGTGTTCGGACTCACCGCGCCCCGAGCGAGTCGACTCGTCGCGGTTCCTTCTAAGCGTCTTTTATGCCCTCTCTAG 384 0.612 EAAVCGYHVPKGSRVMINAWAIGRDGNSWEDPDAFKPSRFLEPHVPDFKGSNFEFIPFGSGRRSCPGMQLGLYTLELAVAHLLHCFTWELPDGMKPSELDTSDVFGLTAPRASRLVAVPSKRLLCPL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01125 127 PANTHER CYTOCHROME P450 84A1-RELATED 1 127 - -
Cca11g01125 127 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 58 67 IPR017972 GO:0005506|GO:0016705
Cca11g01125 127 Pfam Cytochrome P450 4 111 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01125 127 PRINTS E-class P450 group I signature 18 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01125 127 PRINTS E-class P450 group I signature 65 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01125 127 PRINTS E-class P450 group I signature 55 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01125 127 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 1 127 - -
Cca11g01125 127 Gene3D Cytochrome P450 1 116 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01125 127 SUPERFAMILY Cytochrome P450 4 122 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01125 Cca-Chr11 27563778 27564161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01125 1 127 Monolignol Biosynthesis Gene Families AT4G36220 77.165 7.33e-71 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01125 K09755 - gmx:100807448 253.062