Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01113 ATGTTACAGGTAAGGAGTGTGGAAGTAAAGGAAGCTCTGCGCCTTCAGAAAGAAAATAACTTTGTGTTGCTTGATGTAAGGCCAGAAGCACAGTTCAAAGAGGCACATCCTCCAGGTGCAATCAATGTGCAAGTATATAGACTAATAAAAGAGTGGACAGCATGGGACATTGCTAGGCGTGCTGCATTTGCATTTTTTGGCATTTTTGCTGGTACAGAAGAGAACCCTGAGTTCATCAAGAATGTTGAAGCAAAACTAGATAAAAGTGCAAAGATAATAGTCGCTTGCTCTTCAGGGGGTACATTGAGACCATCACAAAATTTGCCTCAGGGACAACAATCAAGACCATACTGA 354 0.4181 MLQVRSVEVKEALRLQKENNFVLLDVRPEAQFKEAHPPGAINVQVYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFIKNVEAKLDKSAKIIVACSSGGTLRPSQNLPQGQQSRPY 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01113 117 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 3 115 IPR043186 -
Cca11g01113 117 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 3 100 IPR036873 -
Cca11g01113 117 CDD RHOD 11 100 - -
Cca11g01113 117 Gene3D - 2 108 IPR036873 -
Cca11g01113 117 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC 3 115 - -
Cca11g01113 117 Pfam Rhodanese-like domain 9 101 IPR001763 -
Cca11g01113 117 ProSiteProfiles Rhodanese domain profile. 17 100 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01113 Cca-Chr11 27146319 27147286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01113 3 115 Sulfurtransferasese or Rhodanese AT4G27700 80.531 9.18e-68 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01113 - - gmx:100792221 204.912