Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca11g01110 | ATGTCGTCGTCCAAGGGCGGTGGCGGTGGCGGCGGCGAGGTTAGGGCTTCGCACATATTGATAAAGCACCAAGGTTCTAGAAGGAAGGCCTCGTGGAAGGATCCAGAAGGAAGCATCATCAAGAGCACCACCAAGGAGAGCGCCGTCTCTCAGCTCAATGCCCTCCGCGACGACATCGTTTCGGGCAAGGCTTCGTTTGAGGATCTCGCCTCGCGCTTCTCCGATTGCAGCTCCGCCAAGCGCGGCGGAGATCTCGGTCCTTTTGGTCGTGGCCAGATGCAGAAGCCTTTTGAAGAAGCAACTTTTGCTCTTCAAGTTGGTGAAATTAGTAACATAGTGGAAACTGACAGTGGAGTCCACATTATCAAGCGAACAAAATGA | 381 | 0.5381 | MSSSKGGGGGGGEVRASHILIKHQGSRRKASWKDPEGSIIKSTTKESAVSQLNALRDDIVSGKASFEDLASRFSDCSSAKRGGDLGPFGRGQMQKPFEEATFALQVGEISNIVETDSGVHIIKRTK | 126 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca11g01110 | 126 | SUPERFAMILY | FKBP-like | 12 | 125 | - | - | |
| Cca11g01110 | 126 | ProSitePatterns | PpiC-type peptidyl-prolyl cis-trans isomerase signature. | 66 | 86 | IPR023058 | - | |
| Cca11g01110 | 126 | Gene3D | - | 11 | 126 | IPR046357 | GO:0003755 | |
| Cca11g01110 | 126 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
| Cca11g01110 | 126 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 125 | - | - | |
| Cca11g01110 | 126 | ProSiteProfiles | PpiC-type peptidyl-prolyl cis-trans isomerase family profile. | 11 | 126 | IPR000297 | GO:0003755 | |
| Cca11g01110 | 126 | Pfam | PPIC-type PPIASE domain | 18 | 125 | IPR000297 | GO:0003755 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Cca11g01110 | 44 | 123 | Sulfurtransferasese or Rhodanese | AT5G19370 | 32.500 | 3.96e-06 | 42.7 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca11g01110 | K09578 | - | gmx:100500451 | 221.861 |