Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01072 ATGGGTTCTATTGAAAATGAAAGCTCGGGACCAGAGGTTATCACCGTTGATGTAGTAGCAGCCAAGGGTCTTATCCAGACCAGTCATGTTTATCTTGATGTCAGGACAGTGGAAGAGTTCGAGAAAGGGCATGTGGATGCAGAGAAGATCATTAACATTCCCTACATGTTTAATACACCACAAGGCAGGGTGAAGAACCCGGAGTTTCTTAAGGAGGTTTCATCTGCTTGCAAGAAAGAAGATCGCATCATCGTGGGTTGTCAAAGTGGAGTTAGATCTCTTTATGCAACTGCTGATCTTCTGACCGAAGGTTTTAAGGATGTGAGCAACATGGGAGGAGGTTATCTGGATTGGGTTAAAAACGAGTTTCCAGTGAAAGCACGTTTGGAATTGGTTAAAAACGAACTTCCAGTGAAAGCACCTTCAGATTTGGTTAAAACTGAATTGCCAGTGAAAGCACCTTTGGAGTTGGTTAAAAATGAATTTCCGGTGAAAGCACCTTTAGTTGGTTAG 513 0.4269 MGSIENESSGPEVITVDVVAAKGLIQTSHVYLDVRTVEEFEKGHVDAEKIINIPYMFNTPQGRVKNPEFLKEVSSACKKEDRIIVGCQSGVRSLYATADLLTEGFKDVSNMGGGYLDWVKNEFPVKARLELVKNELPVKAPSDLVKTELPVKAPLELVKNEFPVKAPLVG 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01072 170 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 129 IPR044684 GO:0003824
Cca11g01072 170 CDD RHOD 20 119 - -
Cca11g01072 170 ProSiteProfiles Rhodanese domain profile. 29 127 IPR001763 -
Cca11g01072 170 SMART rhod_4 16 124 IPR001763 -
Cca11g01072 170 Gene3D - 4 127 IPR036873 -
Cca11g01072 170 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 13 125 IPR036873 -
Cca11g01072 170 Pfam Rhodanese-like domain 27 120 IPR001763 -
Cca11g01072 170 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01072 Cca-Chr11 25647474 25650757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01072 3 130 Sulfurtransferasese or Rhodanese AT5G66170 57.031 1.35e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01072 - K15692 gmx:100792251 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01215 06 26561621 26564253 Cca11g01072 11 25647474 25650757 PCT