Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01017 ATGTACAAAACCGATTGTGCGTTGCAATGCGCCCATAGCCTCTCCCGCAGCAGATCTTTGGCAAACCCTTCGTGTCTCCTCCTCCCTCCAAGATCTCTCCTTTACCGCCACCACCACATCGATCCCGCCACCCTCGCTGCCGCCTCTTTCTCCAAAACCAAACCCCCGCAGCGCCAAAGATGCCTCCTCTTGATcctcctcctctccctcctgctccgcctcctctacaccctctactcccgctcccACGCCTTCGCCAAATACTACTTCGTTCTTGACTGTAGCAGCACCGGCACCCGCTTCTGCCCTCTCTCTTCCCCTTTGCCTCCACGTGCCGCCAAAAACACAGTTCCCGATAGTGTCCCCACCGAGAACACGCTCTTCAAGACTCTCAAACTCAGCGCCTTGTTCAGCCTCTGCTACCTTTTCAACATCTACTTCAATATCTACAACAAGCAGGTGTTGAAGGCGTATCACTTTCCGGTGACTGAGACTCTCGCGCAGTTTGCCATTGGGACTGTGATTGTGGCGTTAATGTGGGGTTTGAATCTGTACAAGAGGCCGAAACTCAGTGGTGCTATGCTTGGAGCGATTTTGTCGTTGGCTGCAGTGCATACTTTGGGGAATCTTTTCACTAATGAGTCTGGGGAAGGtgatggagaaggtaggagaagtggatgtgattcttctccttag 696 0.454 MYKTDCALQCAHSLSRSRSLANPSCLLLPPRSLLYRHHHIDPATLAAASFSKTKPPQRQRCLLLILLLSLLLRLLYTLYSRSHAFAKYYFVLDCSSTGTRFCPLSSPLPPRAAKNTVPDSVPTENTLFKTLKLSALFSLCYLFNIYFNIYNKQVLKAYHFPVTETLAQFAIGTVIVALMWGLNLYKRPKLSGAMLGAILSLAAVHTLGNLFTNESGEGDGEGRRSGCDSSP 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01017 231 PANTHER SOLUTE CARRIER FAMILY 35 80 215 - -
Cca11g01017 231 PANTHER PLASTID PHOSPHATE TRANSLOCATOR 80 215 - -
Cca11g01017 231 Pfam Triose-phosphate Transporter family 132 213 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01017 Cca-Chr11 23394457 23395709 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01017 22 215 Antiporters AT5G33320 46.000 1.26e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01017 K15283 - gmx:732612 182.185