Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01015 ATGGTAATTGGTTTATCATTTTCTTTTGGTTGGATTTTGCTAATGGAGATTGCAAGAATCAGACAATGGCTAAACCTTTTAGTTTGTGCACTACTATTGCTTAAAGGAAAAGGATATATTGTTCCAAAGACTTTGGTCGAGAATGCAGTATCAAAAGGAGCTGTTTGTTTAGATGGCAGTCCCCCAGCTTACCACCTTGATAAGGGATTTGGAGAAGGGATTAACAATTGGATTGTTCACATTGAGGGAGGAGGATGGTGCAACGATGTCACTAGTTGCCTTTACCGTAAGGACTCTCGCTTAGGTTCATCTAAGCAAATGGTTGAGGAACTTGGCTTTTCTGGAATTTTAAGCAATGAACAACAATTTAATCCAGATTTCTACAATTGGAATAGAGTCAAGGTTAGGTACTGTGATGGGTCATCATTCACTGGTGATGTGGAAGAAGTTGATTCAACAACCAATTTGCACTTCAGAGGAGCAAGAATATTTTCAGTTGTAATGGAAGATTTACGGGCAAAAGGAATGGAAAATGCTAAAAATGCTATTCTCTCTGGTTGTTCAGCTGGAGGATTGACCACTATATTACACTGTGATCGCTTTAAAACTTTGTTGCCTTCTGGAGCTAATGTGAAATGTGTTCCAGATGCTGGTTATTTTATCAATGTAAAGGATATCTCAGGAGCAAGTCGCATTGAAGAGTACTACAGTCAAGTTGTTAAAACACATGGCTCTACAGAGAATTTGCCCACATCATGCACTTCAAAATTCAGCCCAGAACTGTGCTTTTTCCCACAATATGTGGCATCACAAATCAATACCCCAATCTTCATTGTAAATTCAGCCTATGACTCATGGCAGATAAATAACATCTTGGCACCTGGTGCTGCTGATCCCAATGACCAATGGCATAACTGCAAGCTTGATATAAGCCGTTGCTCACCTGATCAACTAAGTATAATGCAAGGCTTCAAGATGGAATTTGAAAAGGCATTGAGTGCTGTAGGTGACTCTCCATCTAAAGGAATGTTTATAGATTCTTGTTATGCTCACTGCCAAACAGAATCACAAGAGACATGGTATAAAAGTGACGCTCCACACCTTGCCAATAAAACAATTGCCAAGGCAGTGGGGGACTGGTTTTATGATCGAAGCCCTTTCCATCATGTAGATTGCAATTATCCTTGCAACCCTTCTTGTCAGAGCCGTGTTTTTGATCTAAAAGACCACCCTGGAATATAA 1242 0.3986 MVIGLSFSFGWILLMEIARIRQWLNLLVCALLLLKGKGYIVPKTLVENAVSKGAVCLDGSPPAYHLDKGFGEGINNWIVHIEGGGWCNDVTSCLYRKDSRLGSSKQMVEELGFSGILSNEQQFNPDFYNWNRVKVRYCDGSSFTGDVEEVDSTTNLHFRGARIFSVVMEDLRAKGMENAKNAILSGCSAGGLTTILHCDRFKTLLPSGANVKCVPDAGYFINVKDISGASRIEEYYSQVVKTHGSTENLPTSCTSKFSPELCFFPQYVASQINTPIFIVNSAYDSWQINNILAPGAADPNDQWHNCKLDISRCSPDQLSIMQGFKMEFEKALSAVGDSPSKGMFIDSCYAHCQTESQETWYKSDAPHLANKTIAKAVGDWFYDRSPFHHVDCNYPCNPSCQSRVFDLKDHPGI 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01015 413 Pfam Pectinacetylesterase 37 386 IPR004963 GO:0016787
Cca11g01015 413 PANTHER NOTUM-RELATED 17 408 IPR004963 GO:0016787
Cca11g01015 413 PANTHER PECTIN ACETYLESTERASE 17 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01015 Cca-Chr11 23356695 23366423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01015 19 413 Carbohydrate Esterase AT4G19420 57.442 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01015 K19882 - gmx:100780707 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01015 11 23356695 23366423 Cca11g01015 11 23356695 23366423 ECH