Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01002 ATGTTGTGCCTCTTTGCTTGTTTTCTTCTCATTCTTATTATCTTCAAATCACTCATCAAACCCAAAGGGAGAGAATTGCCACTTCCTCCTGGGACCATGGGTTGGCCTTACATAGGAGAAACCTTCCAAATGTATTCTCAAGACCCAAACGTTTTCTTTGCCACAAAAATCAAGAGGTATGGGTCTATGTTTAAGTCTCACATTTTGGGTTATCCCTGTGTGATGATTTCTGACCCGGAAGCAGCAAAGTTTGTGTTGAACAAAGCTCAACTCTTCAAACCAACATTTCCTGCTAGCAAAGAGAGGATGTTGGGGAAACAAGCAATTTTCTTTCACCAAGGAGCATACCATGCTAAACTCAGAAGGCTTGTCCTTCGCACCTTCATGCCCGAAGCCATCAAAGACATAGTCTCTAGCATTGAATCAATTGCTCAAAGTTGCCTCAAATCATGGGAAGGAAAGATGATCACCACTTTCCTTGAAATGAAAAACTTTACCTTCAATGTTGCCCTGCTTTCAATTTTTGGAAAAGATGAAACTCTATATAGAGAGTCTCTGAAGAGATGCTACTACACCCTTGAGAGAGGGTACAACTCAATGCCCATAAACCTTCCAGGAACACTGTTCCACAAGGCCATGAAGGCAAGGAAAGAGCTTGCACAGATCTTGGCTCAAATCATCTTAACCAGGAGGAACATGAAGCAAGATTACAATGACTTGTTGGGTTCATTCATGAGTGAAAAATCAGGACTCACAGATGAACAAATAGCAGATAACATCATTGGTATCATATTTGCTGCTCGTGACACCACGGCCACAGTGCTTACGTGGATTGTTAAGTACCTTGGTGAAAACCCTAGTGTCTTAGAAGCTGTAACTGAAGAGCAGGAGTCTATATTAAGGGGCAAGAAAGAAAGTGGAGAAGAAATGGGTCTGAATTGGTCAGACACAAAAAATATGCCTGTGACATCCAGGGTCATACAGGAGACTCTAAGAATAGCATCAATTTTGTCTTTTACTTTCAGAGAAGCAGTAGAGGATGTTGAATTTCAAGGGTATCTCATACCAAAAGGGTGGAAAGTTTTACCACTTTTTAGAAACATACACCACAGTCCAGACAACTTCAAAGAGCCAGAGAAGTTTGATCCATCAAGATTTGAGGTTGCTCCAAAACCCAATACTTTTATGCCATTTGGCAATGGGACCCATGCATGTCCTGGCAATGAATTAGCCAAGTTGGAGATTTTGGTGCTTCTACATCACCTGACCACAAAGTACAGGTGGTCTGCAATAGGTGCAAAAAATGGGATTCAGTATGGTCCTTTTGCCCTTCCACAAAATGGATTGCCCATCACACTATATTCCAAGAAATAA 1374 0.4141 MLCLFACFLLILIIFKSLIKPKGRELPLPPGTMGWPYIGETFQMYSQDPNVFFATKIKRYGSMFKSHILGYPCVMISDPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGAYHAKLRRLVLRTFMPEAIKDIVSSIESIAQSCLKSWEGKMITTFLEMKNFTFNVALLSIFGKDETLYRESLKRCYYTLERGYNSMPINLPGTLFHKAMKARKELAQILAQIILTRRNMKQDYNDLLGSFMSEKSGLTDEQIADNIIGIIFAARDTTATVLTWIVKYLGENPSVLEAVTEEQESILRGKKESGEEMGLNWSDTKNMPVTSRVIQETLRIASILSFTFREAVEDVEFQGYLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEVAPKPNTFMPFGNGTHACPGNELAKLEILVLLHHLTTKYRWSAIGAKNGIQYGPFALPQNGLPITLYSKK 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01002 457 Gene3D Cytochrome P450 19 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01002 457 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01002 457 PRINTS E-class P450 group I signature 255 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01002 457 PRINTS E-class P450 group I signature 275 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01002 457 PRINTS E-class P450 group I signature 324 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01002 457 PRINTS E-class P450 group I signature 364 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01002 457 PRINTS E-class P450 group I signature 395 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01002 457 PRINTS E-class P450 group I signature 405 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01002 457 SUPERFAMILY Cytochrome P450 25 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01002 457 PRINTS P450 superfamily signature 266 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01002 457 PRINTS P450 superfamily signature 325 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01002 457 PRINTS P450 superfamily signature 396 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01002 457 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01002 457 PANTHER CYTOCHROME P450 26 9 454 - -
Cca11g01002 457 Pfam Cytochrome P450 29 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g01002 457 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 9 454 - -
Cca11g01002 457 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 398 407 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01002 Cca-Chr11 22712148 22715107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01002 2 451 Cytochrome P450 AT4G19230 72.247 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01002 K09843 - gmx:100807446 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01002 11 22712148 22715107 Cca11g01002 11 22712148 22715107 ECH