Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca11g00999 | ATGCCAGAAAACTGCGTAGCACCCAAATCAGACCACACCAATAGTCACCCTGAGGGAAACATATCAGCCCTTCCAACACAAAAAAATGAGCAATCATTTCCCAAACTCACCATGTACCCCATAACTTTGAAGTTTGAGGAGTTGGTGTACAAAGTTAAAGTAGAGAAGAAGGGTGTGTGTTGGGGGAGCACAAGGAGTGGCAGAGAGAAGACCATACTTAAAGGAGTGACAGGCATGGTGTGTCCAGGAGAAATAATGGTCATGTTGGGGCCATCTGGAAGTGGCAAAACCACACTTCTCACAGCCCTTGGAGGAAGGCTTAGTGGCAAAGTATCAGGAATGGTGACATACAACAACCAACCCTTTTCAGGTGCCATGAAGAGAAGAACAGGTTTTGTGGCTCAGGATGATGTGCTATACCCTCATCTCACAGTCACTGAAACACTACTCTTCACTGCACTTCTGAGGCTTCCCAGCACCTTGACCAAGGATGAGAAGGTTCACCATGTGGAGAGTGTTATCAATGAGCTAGGACTGAGTAGGTGCAGGGGTAGCATGATTGGAGGACCTCTTTTCAGAGGGATATCAGGAGGGGAGAGAAAGAGGGTCAGCATAGGCCAGGAAATGCTCATCAATCCAAGCCTGTTGCTGCTGGATGAGCCCACTTCAGGTTTGGACTCTACAACAGCACAAAGGATCATAAGCACAATCAAAGGCTTGGCAAGCGGGGGTAGAACTGTTGTCACCACCATTCACCAACCCTCTAGTCGCCTCTATCACATGTTTGATAAACTGATCTTGCTCTCTGAAGGAAGCCCCATCTATTGTGGCCCTGCTTCAACTGCAATGGAGTATTTTTCTTCTGTTGGTTTTTCCACATCCATCATTGTCAATCCTGCTGATTTTTTGCTTGATCTTGCCAATGGGATTGCTCCGGACTCCTCCAAGCATGCAACTGAGCAAAGTGAGAGTCAGGAGGCAGAAAAGAAGTTGGTGAGAGAAGCTTTAATCTCTGCTTATGAAAATAACATAGCTCCTAGGCTGAAGGATGAGGTATGTAGCTTGGAGGTGAATAGCTACAAAGTCATGAAGGATGCTTCCACAAGAAACCACACAAAACCGGAGCAATGGTGCACAAGTTGGTGGCATCAATTCAAAGTGCTATTGCAAAGGGGCCTTAGGGAGAGAAGGTTTGAAGCTTTCAACAGGCTGAGAATATTCCAAGTCATAAGTGTTGCTTTTCTTGGTGGACTCCTGTGGTGGCACACCCCAGAGTCACACATTGGAGATCGGATAGCCCTGCTCTTTTTCTTCTCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCTGTCTTCACATTTCCACAAGAGAGAAGAATGCTGATCAAGGAACGTTCATCAGGAATGTACCGTCTTTCATCCTACTTTCTAGCAAGAACAGTAGGAGACTTGCCAATAGAGCTTGCACTTCCAACTGCATTTGTGATCATAATCTATTGGATGGGAGGGCTCAAGCCTCATCCAATGACCTTCATCCTTTCCCTCCTTGTGGTCCTCTACAGTGTCCTTGTCTCTCAAAGCCTTGGCTTAGCCTTTGGTGCCTTTTTGATGGAGGTTAAACAGGCCACAACTTTGGCTTCTGTCACAACCCTTGTGTTCCTCATTGCTGGAGGCTACTACATACAACAGATTCCTCCCTTCATAGAGTGGCTCAAGTACGTGAGCTATAGCTTCTATTGTTACAAGCTTCTTCTTGGTGTTCAGTACAATGATGGTGATTATTATGAGTGCTCAAAGGGTGTCATGTGCAAGGTTGCAGATTTTCCTCCAATCAAATCAGTGGGATTGAATCACTTGTGGGTTGATGTGGCTATTATGGCCATGATGTTGGTAGGTTACAGACTAGCTGCATATTTAGCACTGCAGAGAGTGAGGTAG | 1938 | 0.4598 | MPENCVAPKSDHTNSHPEGNISALPTQKNEQSFPKLTMYPITLKFEELVYKVKVEKKGVCWGSTRSGREKTILKGVTGMVCPGEIMVMLGPSGSGKTTLLTALGGRLSGKVSGMVTYNNQPFSGAMKRRTGFVAQDDVLYPHLTVTETLLFTALLRLPSTLTKDEKVHHVESVINELGLSRCRGSMIGGPLFRGISGGERKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRIISTIKGLASGGRTVVTTIHQPSSRLYHMFDKLILLSEGSPIYCGPASTAMEYFSSVGFSTSIIVNPADFLLDLANGIAPDSSKHATEQSESQEAEKKLVREALISAYENNIAPRLKDEVCSLEVNSYKVMKDASTRNHTKPEQWCTSWWHQFKVLLQRGLRERRFEAFNRLRIFQVISVAFLGGLLWWHTPESHIGDRIALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTVGDLPIELALPTAFVIIIYWMGGLKPHPMTFILSLLVVLYSVLVSQSLGLAFGAFLMEVKQATTLASVTTLVFLIAGGYYIQQIPPFIEWLKYVSYSFYCYKLLLGVQYNDGDYYECSKGVMCKVADFPPIKSVGLNHLWVDVAIMAMMLVGYRLAAYLALQRVR | 645 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca11g00999 | 645 | Pfam | ABC-2 type transporter | 384 | 589 | IPR013525 | GO:0016020|GO:0140359 | |
Cca11g00999 | 645 | CDD | ABCG_EPDR | 40 | 277 | - | - | |
Cca11g00999 | 645 | PANTHER | ABC TRANSPORTER G FAMILY MEMBER 28 | 20 | 643 | - | - | |
Cca11g00999 | 645 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 68 | 288 | IPR027417 | - | |
Cca11g00999 | 645 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 43 | 295 | IPR003439 | GO:0005524 | |
Cca11g00999 | 645 | MobiDBLite | consensus disorder prediction | 8 | 27 | - | - | |
Cca11g00999 | 645 | Pfam | ABC transporter | 73 | 223 | IPR003439 | GO:0005524 | |
Cca11g00999 | 645 | SMART | AAA_5 | 82 | 272 | IPR003593 | - | |
Cca11g00999 | 645 | Pfam | ABC-2 type transporter | 252 | 319 | IPR043926 | GO:0140359 | |
Cca11g00999 | 645 | Gene3D | - | 60 | 290 | IPR027417 | - | |
Cca11g00999 | 645 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Cca11g00999 | 645 | PANTHER | ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED | 20 | 643 | - | - | |
Cca11g00999 | 645 | ProSitePatterns | ABC transporters family signature. | 195 | 209 | IPR017871 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca11g00999 | Cca-Chr11 | 22180689 | 22184335 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca11g00999 | 72 | 272 | Calmodulin-binding Proteins | AT2G36910 | 28.230 | 1.26e-10 | 63.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca11g00999 | K05681 | - | gmx:100776279 | 1150.19 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca11g00999 | 11 | 22180689 | 22184335 | Cca11g00999 | 11 | 22180689 | 22184335 | ECH |