Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00995 ATGGCAGTTTCAGCTTCAGGGGGTGAGATATGGAAGGCCCACACCGCCATGGCAATGGTGCAGTTATTCAACGGAGGCTACCACGTCATCACCAAATTGGCCCTCAACGTTGGAGTCAACCAAATCGTCTTCTGCGTCTTCCGCGATCTCATTGCCCTCGCCATTCTCGCTCCCCTCGCTTTCGTTCGTGAAAGGCGCACGCGACCACCTTTGACCAAACGCCTTTTGCTGTCATTCTTCTTTCTTGGATTAACCGGGATTTTTGGCAACCATCTTTTGTTTCTTATTGGCTTAAGCTATACTAATCCAACTTATGCTGCTGCAATTCAGCCGGCCACTCCAGTTTTTACTTTTCTGATGGCGGTAATCATGGGTACAGAAAGAGTGAACTTACTAAGATATGAAGGTCTGGCTAAGGTTGGAGGAACTTTTACCTGTGTTTTCGGGGCTGTGTTGATGGTTTTGTATCGTGGTCCAGCGTTGATTGGGGATTCAGAAACGGACTTTGTATCACATAGTGAAATAAGTGCCAAAGGTCAACCAGAGCCTTCTGGATGGTTAATTGGTGGTTTGATGGATCTCGGATTAGACCATTTTCATCTCGGGGTTTTGTGCTTCATAGGGAACTGCATGTGCATGGCTGCTTTTCTAGCCATTCAGGCTCCATTATTAAAAAAGTATCCTGCAAACCTATCTGTCACAGCATATTCATACTTCTTTGGAGCTGCACTGATGGTAACTACATCATTCTTTGCAACAAACGAGTCAACTGACTGGAGATTGACACAGTCTGAAACAATTGCCGTAATTTATGCCGGATTTATTGCATCTGCCCTTAATTATGGACTCATTACGTGGTGCAACAAGATCTTGGGGCCAGCCATGGTCGCCCTTTATAATCCACTTCAACCTGGAGCTTCTGCTCTCCTATCCAGAATTTTTCTGGGAAGTCCAATTTACATGGGAAGCATCATAGGTGGATCTTTGATCATTTTTGGTTTGTATGCGGTTACATGGGCGTCTTATAGAGAAAGGCATGCAGCTGTTGGAGTTATTTCTCATGGCTCTTGGGTCTCTGAATCCCTTGTCCATGACAAGAGTTCTTTTAGAGTTAACATTTTCTCAAGCCCCCCAAGCCTGTCCCCAAAGCCTTCAGATTAA 1161 0.4522 MAVSASGGEIWKAHTAMAMVQLFNGGYHVITKLALNVGVNQIVFCVFRDLIALAILAPLAFVRERRTRPPLTKRLLLSFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPATPVFTFLMAVIMGTERVNLLRYEGLAKVGGTFTCVFGAVLMVLYRGPALIGDSETDFVSHSEISAKGQPEPSGWLIGGLMDLGLDHFHLGVLCFIGNCMCMAAFLAIQAPLLKKYPANLSVTAYSYFFGAALMVTTSFFATNESTDWRLTQSETIAVIYAGFIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGSPIYMGSIIGGSLIIFGLYAVTWASYRERHAAVGVISHGSWVSESLVHDKSSFRVNIFSSPPSLSPKPSD 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00995 386 Pfam EamA-like transporter family 18 137 IPR000620 GO:0016020|GO:0016021
Cca11g00995 386 Pfam EamA-like transporter family 201 338 IPR000620 GO:0016020|GO:0016021
Cca11g00995 386 PANTHER WAT1-RELATED PROTEIN 11 372 - -
Cca11g00995 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 344 - -
Cca11g00995 386 PANTHER WAT1-RELATED PROTEIN 11 372 IPR030184 GO:0016021|GO:0022857
Cca11g00995 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00995 Cca-Chr11 21903850 21924404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00995 9 272 Nodulin-like Gene Family AT3G45870 70.833 1.54e-126 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00995 - - gmx:100781969 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00995 11 21903850 21924404 Cca11g00995 11 21903850 21924404 ECH