Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00994 ATGGTCTTTGGCAAAcaacaccaacaccaacacccagccaccaacaccaacaccaacCTCCGTGTCTCCTCCTCCCTCCAGGATCTCTCCTCCTACCGCCACCACCACATCGATCCGACCACCCTCGCCGCCGCCTCTTTCTCCAAAACCAAACCCCCGCCGCGCCGGAGATGcctcctcctgatcctcctcctctccctcctgcttctcctcctgctccccctcctctacaccctctactcccgctcccacgcctccgccAAATACTACGTCGTTCTGGACTGCGGCAGCACCGGCACCCGCGTGTACGTCTACAAGGCCCAAATCCACCACCGCCCCAACACCAACCTCCCCATCGCCATCCACTCCCTCAAAGACGGCCTCCGCCCCAACCCCGCCAGCGCCCGCGCCTACGACCGCATGGAGACCGAGCCCGGCCTCGACAAGCTCCTCCACAACGTCACCGCTTTGAAAGCCGCCCTCAAGCCTCTTCTCCACTGGGCCCAGAAGCAGATTCCACAACCCTCTCATTCCACCACCTCCCTCTTCCTCTACGCCACCGCCGGCCTCCGCAGACTCCCCTTCGACGACTCCAAGTGGCTCCTCGACGCCGCCTGGGCCTTCCTCCGCGCCTCCCCCTTCGTTTGCCGCCGGGATTGGGTCAAGATCATCTCCGGCACCGAGGAGGCTTATTTCGGATGGATTGCGTTGAACTACCACAGCGGTACCCTCGGCGTCAAGCCCAGGAAGCCCACCTTTGGTGCTCTTGATCTCGGAGGCTCTTCCCTTCAGGTAACCTTCGAGGGTGCTGGTAAGCAACACTTGAATAGCGAGACTAGCTTGTACGTTAGGATTGGCTCTGTCAACCATCATTTAACTGCTTATTCGCTTGCTGGCTATGGCCTCAATGAGGCCTTTGATAAGTCTGTTGCGCGTCTTTTTAAGGACTCTAGGAATGTCGTCACTGGGAATGTCGTCTTGGTCAAGCATCCCTGCTTGCAGGCTGGCTACACCCAGCGCTACGCCTGCTCCTTTTGCTCGCCCCTCGACAGGGGAGGGGAGAGTCCTAGAGTGGAGGGGAGTGTGCTGGGGAAGAAGGGGGAGTGGAGGACCGCCGTGGCGCTTGTTGGCGCCCCGGATTGGGAGAAGTGCAGCGCGCTTGCGAAGGTGACGGTGAATTTGTCTGAGTGGTCGGATGTGAGGCCGGGACTGGACTGCGAAGTGCACCCGTGTGCACTTCGCGATAATTTGCCCCGGCCCACGGGGCATTTTTATATCATTTCTGGGTTTTTTGTGGTGTATAGGTTCTTCAACCTGACTGCGGAGGCCACACTTGAGGATGTGTTGGAGAAGGGGAGGGAGTTTTGTGAGAAGAGATGGAGTGTTGCCAGGAAGAGTGTTGCCCCTCAGCCGTTTATTGAGCAGTACTGCTTTCGGGCGCCGTACATTGTCTCCTTGCTGAGGGAGGGTTTGCATATTACTGATAAGCATATAACTGTTGGCTCTGGAAGTATCACTTGGACGCTTGGGGTGGCCTTGTTGGAAGCTGGCAAGTCGTATGCTGTAAGATTCGGGCTTCGAGGTTTTGACTTGCTTCAGATGAAGATAAATCCCAttattcttattcccattttgatactttctttcattcttctgcttTGTGCTTTATCCTGGGTTGTCAATTGGATGCCGAGATTTTTCCGGAGGCAGTATCTTCCATTTTTCAGGCATAACGGCGGGTCAAGTGCATCTGGTATTAATATACCATCTCCTTTCCGTTTTCAGCGATGGAGTCCTATGAATTCTGGAGATGGAAAAATAAAGACCCCACTCAGCCCAACAGTTGCAGGTTCACAGGATAGACCATTTAGCCTGGGGCATGGTCTTGGTGATAGCAGTGGTAACATCCAGCTGATGGAATCCTCCTTTTATCCATCAGCTACTAGTGTCTCGCATAGTTATTCGTCAAACAATTTAGGGCAGATGCAGTTTGACAACAGTAGTATAGGGTCGTTCTGGTCACCCCACAGAAGCAAGATGCGTCTGCAGAGTTTAGGGTGTGATCTTCCGAAAACTTTGAATTTCAGTTTTTGTCATGGAGATGACCAAGGGGGCTAA 2118 0.5019 MVFGKQHQHQHPATNTNTNLRVSSSLQDLSSYRHHHIDPTTLAAASFSKTKPPPRRRCLLLILLLSLLLLLLLPLLYTLYSRSHASAKYYVVLDCGSTGTRVYVYKAQIHHRPNTNLPIAIHSLKDGLRPNPASARAYDRMETEPGLDKLLHNVTALKAALKPLLHWAQKQIPQPSHSTTSLFLYATAGLRRLPFDDSKWLLDAAWAFLRASPFVCRRDWVKIISGTEEAYFGWIALNYHSGTLGVKPRKPTFGALDLGGSSLQVTFEGAGKQHLNSETSLYVRIGSVNHHLTAYSLAGYGLNEAFDKSVARLFKDSRNVVTGNVVLVKHPCLQAGYTQRYACSFCSPLDRGGESPRVEGSVLGKKGEWRTAVALVGAPDWEKCSALAKVTVNLSEWSDVRPGLDCEVHPCALRDNLPRPTGHFYIISGFFVVYRFFNLTAEATLEDVLEKGREFCEKRWSVARKSVAPQPFIEQYCFRAPYIVSLLREGLHITDKHITVGSGSITWTLGVALLEAGKSYAVRFGLRGFDLLQMKINPIILIPILILSFILLLCALSWVVNWMPRFFRRQYLPFFRHNGGSSASGINIPSPFRFQRWSPMNSGDGKIKTPLSPTVAGSQDRPFSLGHGLGDSSGNIQLMESSFYPSATSVSHSYSSNNLGQMQFDNSSIGSFWSPHRSKMRLQSLGCDLPKTLNFSFCHGDDQGG 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00994 705 Pfam GDA1/CD39 (nucleoside phosphatase) family 83 515 IPR000407 GO:0016787
Cca11g00994 705 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 30 677 IPR000407 GO:0016787
Cca11g00994 705 Gene3D - 78 225 - -
Cca11g00994 705 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 30 677 - -
Cca11g00994 705 Gene3D Exopolyphosphatase. Domain 2 226 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00994 Cca-Chr11 21848449 21858573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00994 20 684 Nodulin-like Gene Family AT4G19180 57.986 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00994 - - gmx:100816548 1035.4