Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00991 ATGTCTTCTTCTGGTTATGCCACAAGCAGTGCTTTGTTTTTTCTGTTTCTCGCTGTGCTGGTTGCAAAAGTTAGCTTTTGTTTTTCCACCAAGGTTTATGTAGTGTACATGGGAAGCAAAAGTGGGGAACACCCAGATGATATTCTGAAGGAAAATCATCAAATGCTTGCTTCTGTTCACAGTGGAAGCATTGAACAAGCTCAAGCATCTCATGTTTATAGCTATAAACATGCTTTTAGAGGCTTTGCAGCCAAGCTCAGTGATGAACAGGCTTCCCAAATTTCTAAAATGCCAGGAGTGGTTTCTGTTTTTCCCAATTCTAAGAGAAAGCTGCACACAACTCATTCATGGGATTTCATGGGACTTTTGGATGACCAAACCATGGAGACTCTTGGTTACTCCATCAGAAACCAAGAAAACATCATCATTGGTTTCATTGATACTGGAATTTGGCCAGAATCCCCAAGCTTCAGTGACACCGACATGCCTGCAGTGCCACCTGGCTGGAAGGGCAAATGTCAACAAGGAGAGGCATTCAATGCCTCATCTTGCAACAGGAAAGTGATTGGAGCTAGATACTACATGAGTGGATATGAGGCTGAGGAAGAGTCAGATGCAAAAATCTCCTTCAGATCTGCAAGGGACAGCACTGGCCATGGAAGCCACACAGCCTCTATAGCTGCAGGGAGGTATGTGGCAAACATGAATTACAAGGGTCTGGCTGGTGGAGGAGCAAGAGGAGGTGCACCATTGGCCAGAATTGCTGTGTACAAGACATGTTGGGACTCAGGTTGCTATGATGTGGACTTGTTGGCTGCTTTTGATGATGCCATAAGAGATGGGGTTCACATTTTGTCTCTATCTCTGGGTGCTGAATCACCCCAAGGAGACTATTTCAGTGATGCCATTTCTGTGGGGTCATTTCATGCTGCTAGTCGTGGGGTGCTGGTCGTTGCATCGGCTGGAAATGAAGGGAGTGCTGCTTCTGCCACTAACCTTGCACCATGGATGCTCACTGTTGCTGCCAGCTCAACAGATAGGGATTTCACTTCAGATGTCATTTTGGGAAATGGTGCTAAAATCATGGGTGAAAGTCTCAGTCTCTTTGAAATGAATGCCTCCACAAGGATAATTTCTGCTTCTGTAGCCAATGGAGGATACTTTACTCCTTATCAATCCAGTTACTGTTTGGAGAGTTCTCTGAATAAAACAAAGAGCAAAGGCAAGGTTCTGGTGTGTAGACATGTAGAGAGTTCAACGGAGTCAAAGGTGCAAAAGAGCAAGATAGTGAAAAATGCAGGTGGAGTTGGCATGATACTAATTGATGAGACAGATCAAGATGTTGCCATCCCATTTGTGATCCCTTCAGCTATTGTTGGAAAGAAAACAGGGGAACAGATTCTATCCTATCTCAAGACTACACGTAAGCCAGTGTCAAGGATATTTGGAGCCAAGACAGTTCTAGGAGCACATCCTGCACCACGTGTGGCAGCATTTTCTTCTAAAGGCCCCAATTCTTTAAACCCAGAAATTCTGAAGCCTGATGTCACAGCTCCAGGACTAAATATCCTTGCAGCATGGTCTCCAGCAGCTGGAAATATGTTCAACATTCTCTCAGGAACTTCTATGGCTTGTCCTCATGTAACCGGAATAGCAACCTTAGTCAAAGCTGTCCATCCTTCATGGTCTCCATCTGCTATCAAATCTGCCATCATGACCACTGCCACAATTCTGGATAAGCACCACAGACCCATCATTGCAGATCCAGAACAAAGATGGGCTAATGCATTTGATTACGGATCAGGGTTTGTGAACCCTGCTAGAGTTCTTGATCCTGGTCTCATCTATGACTCAGAGCCAGCAGATTTTGTTGCATTCCTGTGTTCAGTGGGCTATGATCAGAGGTCACTCCATCAAGTTACAAGAGACAACAGCACATGTGACAGGGCATTCAGTACAGCATCTGACCTCAACTACCCTTCCATTGCAGTGCCAAATCTTAAAGACAACTTTTCAGTTTCTAGGATTGTGACCAATGTTGGCAAACCAAGAAATGTTTATAGAGCTGTAGTGTCTTCTCCACCTGGTGTTAATATCAGTGTTATACCTAACAGGTTAATCTTCACAAGAATTGGGCAGAAAATCAACTTCACTGTGAATTTCAAAGTAACTGATCCCTCAAAGGGGTATGCATTTGGGTTCTTGTCATGGAGAAATAGAAGATCACAAGTCACTAGTCCTTTGGTTGTCCAAGTTGCACCTGGAAAAAAGGGGTTGGTCAGATAG 2286 0.4427 MSSSGYATSSALFFLFLAVLVAKVSFCFSTKVYVVYMGSKSGEHPDDILKENHQMLASVHSGSIEQAQASHVYSYKHAFRGFAAKLSDEQASQISKMPGVVSVFPNSKRKLHTTHSWDFMGLLDDQTMETLGYSIRNQENIIIGFIDTGIWPESPSFSDTDMPAVPPGWKGKCQQGEAFNASSCNRKVIGARYYMSGYEAEEESDAKISFRSARDSTGHGSHTASIAAGRYVANMNYKGLAGGGARGGAPLARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGAESPQGDYFSDAISVGSFHAASRGVLVVASAGNEGSAASATNLAPWMLTVAASSTDRDFTSDVILGNGAKIMGESLSLFEMNASTRIISASVANGGYFTPYQSSYCLESSLNKTKSKGKVLVCRHVESSTESKVQKSKIVKNAGGVGMILIDETDQDVAIPFVIPSAIVGKKTGEQILSYLKTTRKPVSRIFGAKTVLGAHPAPRVAAFSSKGPNSLNPEILKPDVTAPGLNILAAWSPAAGNMFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATILDKHHRPIIADPEQRWANAFDYGSGFVNPARVLDPGLIYDSEPADFVAFLCSVGYDQRSLHQVTRDNSTCDRAFSTASDLNYPSIAVPNLKDNFSVSRIVTNVGKPRNVYRAVVSSPPGVNISVIPNRLIFTRIGQKINFTVNFKVTDPSKGYAFGFLSWRNRRSQVTSPLVVQVAPGKKGLVR 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00991 761 Pfam PA domain 396 467 IPR003137 -
Cca11g00991 761 Gene3D - 627 753 - -
Cca11g00991 761 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 112 IPR037045 -
Cca11g00991 761 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Cca11g00991 761 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Cca11g00991 761 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Cca11g00991 761 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 754 IPR045051 -
Cca11g00991 761 CDD Peptidases_S8_3 110 576 IPR034197 -
Cca11g00991 761 Gene3D Peptidase S8/S53 domain 140 623 IPR036852 GO:0004252|GO:0006508
Cca11g00991 761 ProSiteProfiles Serine proteases, subtilase domain profile. 116 610 - -
Cca11g00991 761 Pfam Fibronectin type-III domain 656 750 IPR041469 -
Cca11g00991 761 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 21 754 - -
Cca11g00991 761 SUPERFAMILY Subtilisin-like 111 614 IPR036852 GO:0004252|GO:0006508
Cca11g00991 761 Pfam Subtilase family 139 578 IPR000209 GO:0006508|GO:0008236
Cca11g00991 761 CDD PA_subtilisin_like 352 481 - -
Cca11g00991 761 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Cca11g00991 761 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
Cca11g00991 761 Gene3D - 346 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00991 Cca-Chr11 21722652 21727881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00991 33 752 Subtilisin-like Serine Gene Family AT2G04160 43.142 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00991 - - gmx:100808547 1392.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00991 11 21722652 21727881 Cca11g00991 11 21722652 21727881 ECH