Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00976 ATGACCCTCCAAGCTGATTCAGCAGCAGCAGCAGAGCCACAACCACCGGATTCCGCAACAACCAACGGCGTCTCCACCACCGCTGACGAAACCCCACAgccaccgtcatcacctcctcctccgccatcgcgtccgaccccgccgccAGAGCTGCGCGTCCCAATATGGTGGCCGGAGAACGGGAACCTGAGCATGGAATGGATAGAGAACCTGATGTCGTGCTTCGATTGGTCTTCGCGGAACCTCCCTCCGTCGGAGTTCCCCTCGGCTCTCCCCGTCCACGTCTTCGACTCTCTCATCCTCATCGCCTCCAAGATTCTCCACAAGGAGCCCAATTGCGTCACCATAGACCCCTTCCGCCCTAGCCCCGACGATtcctcttcctcctcctccgccgcctccgtcgtcgtcgtcGGCGACGTTCACGGCCAATTGCACGATCTGCTTTTCCTCCTCCGAGATGCCGGGTTCCCCTCCCGAGATCGAATCTTCGTCTTCAACGGCGATTACGTGGATCGAGGAGCTTGGGGCCTTGAAACCTTCTTACTCTTGTTGGCTTGGAAGGTATTCATGCCACATAACATATATATGTTACGAGGGAATCATGAATCAAAATACTGTACATCAGTTTATGGTTTTGAGAAAGAAGTAATGGTAAAGTATGGTGATAAAGGTAAGCATGTGTACCGGAAATGTTTGGGGTGCTTTGAAGGTCTTCCTTTGGCTTCTATTATAGCTGGGTGTGTATACACAGCTCATGGAGGACTTTTCCGCAGTGTAACTGTGACACCATCAAAGAGGTTTAAAGGAAAGAAGAACCGGAAGATTAATGTTAACCATGATAGCAAAATTCTATCTCTAGGTTCCTTGGAAGAATTGTCTAAGGCTCGTAGATCAGTGCTGGATCCTCCTTGGGAAGGCCCAAACTTGATTCCTGGTGATGTTTTGTGGTCCGATCCATCAAAAACTCCTGGTCTTGCTCCAAACAAAGAAAGAGGCATTGGCTTGTTGTGGGGTCCTGATTGTACTGAAGAATTTTTGAAGAAGTACCAACTGAAGTTGGTCATCAGGTCACATGAAGGTCCTGATGCTAGGGAAAAAAGGGATGGTTTTGGTGGAATGGATGAAGGTTACACTATTGATCATATTGTAGATTCTGGAAAGCTGGTTACTGTGTTTAGTGCTCCAGATTACCCACAATTTCAGGCAACGGAGGAGAGGTATAACAACAAAGGTGCCTATGTAGTCCTAGAACCCCCGAATTTTGATAATCCTACATTTCATGGCTTTTCAGCAGTTACTCCAAGGCCGAAGGTGAATGCCTATTACGATTACGTAGAGGTGATAGACTCCGATGAAGAATTGGACTTGGCTTCCATGGTAACTACTTGA 1392 0.4454 MTLQADSAAAAEPQPPDSATTNGVSTTADETPQPPSSPPPPPSRPTPPPELRVPIWWPENGNLSMEWIENLMSCFDWSSRNLPPSEFPSALPVHVFDSLILIASKILHKEPNCVTIDPFRPSPDDSSSSSSAASVVVVGDVHGQLHDLLFLLRDAGFPSRDRIFVFNGDYVDRGAWGLETFLLLLAWKVFMPHNIYMLRGNHESKYCTSVYGFEKEVMVKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVTVTPSKRFKGKKNRKINVNHDSKILSLGSLEELSKARRSVLDPPWEGPNLIPGDVLWSDPSKTPGLAPNKERGIGLLWGPDCTEEFLKKYQLKLVIRSHEGPDAREKRDGFGGMDEGYTIDHIVDSGKLVTVFSAPDYPQFQATEERYNNKGAYVVLEPPNFDNPTFHGFSAVTPRPKVNAYYDYVEVIDSDEELDLASMVTT 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00976 463 Gene3D - 86 455 IPR029052 -
Cca11g00976 463 MobiDBLite consensus disorder prediction 32 53 - -
Cca11g00976 463 CDD MPP_PP7 57 444 IPR041754 -
Cca11g00976 463 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 37 460 - -
Cca11g00976 463 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 37 460 - -
Cca11g00976 463 SUPERFAMILY Metallo-dependent phosphatases 86 442 IPR029052 -
Cca11g00976 463 SMART pp2a_7 91 437 IPR006186 GO:0016787
Cca11g00976 463 MobiDBLite consensus disorder prediction 14 31 - -
Cca11g00976 463 PRINTS Serine/threonine phosphatase family signature 134 161 IPR006186 GO:0016787
Cca11g00976 463 PRINTS Serine/threonine phosphatase family signature 164 191 IPR006186 GO:0016787
Cca11g00976 463 PRINTS Serine/threonine phosphatase family signature 197 221 IPR006186 GO:0016787
Cca11g00976 463 PRINTS Serine/threonine phosphatase family signature 234 260 IPR006186 GO:0016787
Cca11g00976 463 PRINTS Serine/threonine phosphatase family signature 294 321 IPR006186 GO:0016787
Cca11g00976 463 PRINTS Serine/threonine phosphatase family signature 388 404 IPR006186 GO:0016787
Cca11g00976 463 MobiDBLite consensus disorder prediction 1 53 - -
Cca11g00976 463 ProSitePatterns Serine/threonine specific protein phosphatases signature. 198 203 IPR006186 GO:0016787
Cca11g00976 463 Pfam Calcineurin-like phosphoesterase 134 362 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00976 Cca-Chr11 21043073 21057984 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00976 46 354 Calmodulin-binding Proteins AT5G63870 69.355 2.65e-156 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00976 K04460 - gmx:100810695 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00976 11 21043073 21057984 Cca11g00976 11 21043073 21057984 ECH