Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00973 ATGACATGCACCATTTATCTGAGAGGCTTTTGGGCTGAAGACCAGCTAAAAATAGAAAGCACCAAACTGTTCAATATCCAAAGATCTTCTGTTGCCAGACATAATGGAAGGTCTCATCAACTTACTTTTTCTTCCCAAACTTCAAATACGTATGAGGATGAAGTGGCAGATAAGTCTGACTTGGGTGAAGAACACCAGTATGAAATTACTGAAAGCATGCGTTTGGAGATGGAATATTATGCTGATCGAGCATGTGTTTCTAATCCATTGAGGATAAGTTCAGCAATTCAGGACATGATTCTGCCCATGCTTCAATTTTCTCTCTTGTTTGTTTTACAGGAGTCCAGATGGTTGCGTAGTGGCATCAGCAGCAGCGGATTAAACATTGAGGTAACAAGGTTAGTGAAACAAGGTACTGGGAAGACTACTCTAGCAATAGGTGATGGTTCAAATGATGTTGGCATGATTCAAGCAACAGATATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGGCTGTGATGGCTAGTGACATTGCGATTGCCCAGTTTCGATTTTTAGAGAGGCTTCTAGTTGTCCATGGACATTGGTGTTACAAGAGGATTGCACAAATGTTATGCATGCATATATGTTATTTATTCTACAAGAATATTGCATTTGGCCTCACCATATTCTATTTTGAGGCCTTCACATGCTTCTCTGGTCAATCGGTTTATTACGACTGGTACATGATTTTGTTCAATGTTGTTTTGACATCATTACCCGTTATTTCCCTTGGTGTTTTTGAACAAGATGTTCCATCAGAAGTTTGTTTACAGTTCCGTTCTCTTGAAATTTTCCAGCACTGTATCAACAAGGACCCAAGAATTTGTTCTTTGTCTAGTACAGAATATTGGGATGGATGGGCAATGGTCTCTATGCCTCTTTCATCATCTTCTTCCTTATCGTCACCATCTTCTATGACCAATCATTTCGTTCCGACGGCCAGACAGCCGACATGGCTGCTATTGGGAGAATAA 1020 0.4049 MTCTIYLRGFWAEDQLKIESTKLFNIQRSSVARHNGRSHQLTFSSQTSNTYEDEVADKSDLGEEHQYEITESMRLEMEYYADRACVSNPLRISSAIQDMILPMLQFSLLFVLQESRWLRSGISSSGLNIEVTRLVKQGTGKTTLAIGDGSNDVGMIQATDIGVGISGVEGMQAVMASDIAIAQFRFLERLLVVHGHWCYKRIAQMLCMHICYLFYKNIAFGLTIFYFEAFTCFSGQSVYYDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFRSLEIFQHCINKDPRICSLSSTEYWDGWAMVSMPLSSSSSLSSPSSMTNHFVPTARQPTWLLLGE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00973 339 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 137 231 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cca11g00973 339 Gene3D - 30 191 IPR023214 -
Cca11g00973 339 SUPERFAMILY Calcium ATPase, transmembrane domain M 195 268 IPR023298 -
Cca11g00973 339 MobiDBLite consensus disorder prediction 37 56 - -
Cca11g00973 339 SUPERFAMILY HAD-like 131 201 IPR036412 -
Cca11g00973 339 MobiDBLite consensus disorder prediction 37 52 - -
Cca11g00973 339 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 130 277 - -
Cca11g00973 339 Pfam Phospholipid-translocating P-type ATPase C-terminal 174 276 IPR032630 -
Cca11g00973 339 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 130 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00973 Cca-Chr11 20972755 20976888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00973 131 277 Primary Pumps ATPases AT1G72700 84.354 8.11e-79 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00973 K01530 - gmx:100778710 261.151