Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00949 ATGTCTGTCTCAAAGTACAAAAAGCTGTGCCTTTGTCTTGTTTCATTGTTCTGCTTTGGTTGTGTGGCTATGGCTTCTAGTGAGAGTAGTAGTGGTTCCAAAGAGCTTGATCAGACACCAACATGGGCTGTGGCTTGTGTCTGCACTGTTTTCATCTTGATTTCCTTAACTCTGGAGAAAAGCCTTCACAAACTGGGAACGTGGCTACGGGAAAAGCACAAGAAGGCTTTGCTTGAGGCTTTGGAAAAGGTCAAAGCTGAGTTGATGATTCTTGGTTTCCTTTCATTGCTTCTGACTTTCGGGCAGAGTTACATTGTTAGAATATGTATTCCTCTCAATGTGGCAGACAAATTGTTGCCTTGTAAGTATGTTGGTACCGACAATGAATCAAGTAGTGAAGAGGAACACCGTAGGAAGCTTCTTTCTTATGAACGCAGATATTTGTCAGATGAAGCTACCCCTTATCAATGCGGCAAGGGACATCAGCCACTTATATCTGTGAATGGATTGCACCAGTTACACATCCTCATATTCTTCTTAGCTGTCCTTCATGTGCTTTACAGTGCTGTCACAATGCTTCTCGGAAGACTAAAGATTCGAGGATGGAAGGCATGGGAGGCAGAAACTTCATCTCATGGTTACGAGTTTGCCAATGATCCTTCAAGATTCCGGCTTACACATGAAACATCGTTTGTGAGAGGTCATGCTTCATTTTGGACAAGATATTCAATCTTCTTCTATATAGGATGCTTCTTTAGACAATTTTATAGGTCTGTGGGCAAGGCTGACTACTTGGCTTTGCGCAATGGATTCATCGCTGTCCACCTGTCTCCTGGAAGTAAATTTAACTTCCAAAAGTATATCAAAAGATCCTTGGAGGATGACTTCAAGGTAGTTGTTGGAGTCAGTCCTGTCCTCTGGGCAGCATTTGTTTTTTTCCTGCTTCTAAATACCTACAATTATAAACCATTTAATTGGTTGCAGATAATTTTTGCTGTTGGAACCAAACTTCAAGCCGCATTGGCAATGATGGCTATTGAAATCACAGAAAGACATGCTGTTGTACAAGGGATTCCTCTTGTTCAAGGCTCAGACAGATATTTTTGGTTTGGTCAGCCTCAGTTAGTTCTTCATCTTATCCATTTTGCTTTGTTCCAGAATGCATTCCAGATAACATATTTCTTGTGGATATGGTATTCTTTTGGGCTGAAAAACTGTTTCCATGCTGACACTGAGGTTGCAATAGTGAAAGTAGCTTTAGGGGTTGGAGTTCTTTGCCTCTGCAGCTACATCACCCTTCCATTATATGCTCTTGTTACTCAGATGGGATCAAGAATGAAAAAATCAATATTTGATGAACAAACATCAAAGGCGTTAAAGAAATGGCACATGGCTGTGAAAAAGAAGCAAGGAGTGAAACTAGGGCAATCCAGAGTGCGAGCCATGGATGGAAGCACCACAGATTCAACAGTACACTCTTCTGGCCCCACACTACACCGTTTCAAAACCACTGGTCACTCAACTTCTCACACCATGTCAACCTACGGTGACCAAGATGATTACCATTCTGATAATGAATTGACTTCCATTTCACCAACATCAAGCTTGATAGTAAGAGTGGACCATGATGAGCAAGAACCAGCAAAAGAAATTGAACACCACCCCACAGCCAACAATCAATAG 1683 0.4171 MSVSKYKKLCLCLVSLFCFGCVAMASSESSSGSKELDQTPTWAVACVCTVFILISLTLEKSLHKLGTWLREKHKKALLEALEKVKAELMILGFLSLLLTFGQSYIVRICIPLNVADKLLPCKYVGTDNESSSEEEHRRKLLSYERRYLSDEATPYQCGKGHQPLISVNGLHQLHILIFFLAVLHVLYSAVTMLLGRLKIRGWKAWEAETSSHGYEFANDPSRFRLTHETSFVRGHASFWTRYSIFFYIGCFFRQFYRSVGKADYLALRNGFIAVHLSPGSKFNFQKYIKRSLEDDFKVVVGVSPVLWAAFVFFLLLNTYNYKPFNWLQIIFAVGTKLQAALAMMAIEITERHAVVQGIPLVQGSDRYFWFGQPQLVLHLIHFALFQNAFQITYFLWIWYSFGLKNCFHADTEVAIVKVALGVGVLCLCSYITLPLYALVTQMGSRMKKSIFDEQTSKALKKWHMAVKKKQGVKLGQSRVRAMDGSTTDSTVHSSGPTLHRFKTTGHSTSHTMSTYGDQDDYHSDNELTSISPTSSLIVRVDHDEQEPAKEIEHHPTANNQ 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00949 560 MobiDBLite consensus disorder prediction 483 516 - -
Cca11g00949 560 PANTHER MLO-LIKE PROTEIN 1 19 554 IPR004326 GO:0006952|GO:0016021
Cca11g00949 560 MobiDBLite consensus disorder prediction 483 520 - -
Cca11g00949 560 Pfam Mlo family 34 493 IPR004326 GO:0006952|GO:0016021
Cca11g00949 560 PANTHER MLO-LIKE PROTEIN 19 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00949 Cca-Chr11 20327194 20332943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00949 22 544 MLO family AT2G17480 63.519 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00949 K08472 - gmx:100814443 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00949 11 20327194 20332943 Cca11g00949 11 20327194 20332943 ECH
Cca06g01163 06 26016337 26021989 Cca11g00949 11 20327194 20332943 ECH