Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00903 ATGGAGAGGTACAAGTTAATTAAGGAAGTTGGTGATGGAACATTTGGGACTGTTTGGAGAGCCATTAACAAGCAAAGTGGTGAAGTAGTCGCAATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCATTACGAAAAATGAGTCATCCAAATATCGTGAAGCTGAAGGAAGTTATTCGAGAAAGTGACATTCTGTGCCTTGTTTTTGAGTACATGGAATGCAATCTCTACCAACTTATGAAAAACAGGGAAAAGCTGTTTTCTGAAAATGAAATTAGAAACTGGTGTTTTCAAGTTTTCCAAGGTCTAGCTTACATGCACCAGCGTGGATACTTTCATCGTGATCTGAAGCCTGAAAACTTGCTGGTCAGCAAGGATGTCATCAAAATTGCTGATTTTGGCCTAGCCCGAGAGATCAGTTCACAACCACCATATACTGAGTATGTCTCCACACGGTGGTATCGTGCTCCTGAAGTCCTGCTTCAGTCCCATATATACAGCTCTAAAGTTGATATGTGGGCAATGGGTGCTATTATGGCTGAGTTGTTCACTCTTCGTCCCCTATTCCCTGGTACCAGTGAAGCAGATGAGATCTATAAAATATGCAGTGTGATAGGTAGTCCAACTACTGAATCTTGGGCAGATGGACTCAAACTTGCCAGGGATATCAACTATCAATTTCCACAGCTTGCTAGTGTGCATCTCTCAGCATTAATCCCATCCAGAAGTGATGATGCAATCAGCCTTGTTACATCTCTTTGTTCATGGGATCCCTGCAAGAGACCAACAGCAGCAGAGGCTCTCCAACATCCTTTCTTCCAGAGTTGCTTTTACATTCCTCCGTCCCTTCGCACCAGAGCTGTAGCCAGAACTCCTCCATCTGCTGGGATAAGGGGATCTCTAGATCGGCCTGGGCTTAAGAGATACTCTGGTGCTTTGCCTAATACAAAAATCACCAACAATTATTCTTCCCCGAAAGTACAAGCTTCTTTAGCTTCAGGTGTACAACGGAAGCTGGATATGGCAAATGAGGATGGAATTAAGAACAAAAAGTCATTGAAGACTACTCCATCAAAATATCGATTACCAGGAAAAGACAGCCCTACATCTATAAACAAGGGGAGGACTGCACGTGGGGTTTCAGAAACAGCTGAGAAGTTGGGCAATATGGCGATTGGCACTCGAAGACAGTCGATGGGACAAACCCGTCCACCCCCAATGAAGGCTGGAGTCAATTGGATTTCTGAATCTGGAAACTTCATGGTCAAGTCCAGACCAACTGAAAGAACTTTAACAAGAAAAGTTGCTGGATGA 1344 0.4338 MERYKLIKEVGDGTFGTVWRAINKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMSHPNIVKLKEVIRESDILCLVFEYMECNLYQLMKNREKLFSENEIRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVSKDVIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSHIYSSKVDMWAMGAIMAELFTLRPLFPGTSEADEIYKICSVIGSPTTESWADGLKLARDINYQFPQLASVHLSALIPSRSDDAISLVTSLCSWDPCKRPTAAEALQHPFFQSCFYIPPSLRTRAVARTPPSAGIRGSLDRPGLKRYSGALPNTKITNNYSSPKVQASLASGVQRKLDMANEDGIKNKKSLKTTPSKYRLPGKDSPTSINKGRTARGVSETAEKLGNMAIGTRRQSMGQTRPPPMKAGVNWISESGNFMVKSRPTERTLTRKVAG 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00903 447 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00903 447 MobiDBLite consensus disorder prediction 352 389 - -
Cca11g00903 447 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 426 - -
Cca11g00903 447 CDD STKc_MAK_like 4 283 - -
Cca11g00903 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Cca11g00903 447 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Cca11g00903 447 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Cca11g00903 447 PANTHER - 1 426 - -
Cca11g00903 447 MobiDBLite consensus disorder prediction 372 387 - -
Cca11g00903 447 Gene3D Transferase(Phosphotransferase) domain 1 83 288 - -
Cca11g00903 447 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00903 447 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00903 447 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00903 Cca-Chr11 18470561 18476305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00903 1 290 Core Cell Cycle Gene Families AT3G48750 37.037 2.06e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Cca11g00903 Pkinase 4.9e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00903 K08829 - gmx:100784474 840.491