Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00836 ATGCCATCTCAGATCCTTCCCATGCCCAACCGTCCCTCCGATCCCTCTCCTCCGATACTGGTCAAGGCCAAAGACGACGACGACGACGCTGCCAATGACCCCTCCGCCAGTCTCCTCCGCTCCTTCCGAGACTTGTCCTTCAAGCCTCCCTTGCCCAGGGCCTCCAGCTTCACCGCCTCCTCCCGCAAACTCAACGCTCCCTCTTCTTTCCACCAGAAGCGCCGCCGCCGTGCCGCCAGCCAGGACTCCTTCCCCTCCCTTCCCCATGACACTGCCTCCTCCCGCACCTCCTCCTTCGGCCGCGACGTCGCCTCCGAGACCTTTCTCTTGACCCGCCTCGGCTTCAAGATGCTCAGTTACCTCGGGGTAGGCTATAAATGGATTACGAGATTTCTTGCCCTTGGTTGTTATGCAGTGCTGCTTTTCCCAGGCTTTATTCAAGTTGGATATTACTATTTCTTCTCCAAACAGATACGCAGAAGCATAGTTTATGGAGATAAACCACGAAATAGGCTTGACTTGTACTTACCTAAAAACAGCAATGGTCCAAAACCAGTTGTTGCTTTTATTACTGGTGGTGCCTGGATTATTGGTTACAAAGCATGGGGTTCTCTTTTAGGCCAACAGTTATCAGAGAGAGATATCATTGTGGCATGCATAGATTACAGAAATTTTCCCCAGGGAACCATCAGTGATATGATAGCTGATTCTTCTCAAGGTATCTCATTTGTGTGCAACAATATTGCAGAATATGGAGGTGACCCTAACAGAATTTACTTAATGGGGCAGTCAGCTGGGGCACATATTGCTGCGTGTGCAATTGTGGAGCAGGCAATCAAAGAGGCAGGTGAAGGAGAAAGTACTTCTTGGAGTCTTTCCCAGATTAAGGCTTATTTTGGTTTATCTGGAGGGTATAATTTGTTTAACTTAGTAGATCACTTCAACAGTAGAGGTCTTTATCGGTCCATCTTTTTAAGCATAATGGAAGGGGAGGAATCCCTGCGACGGTTTTCTCCAGAGCTAATGGTTCAAGATCCAAACATTGGAAATGCGATTTCTCTACTACCTCCTATAGTTCTTTTTCATGGCACTGGGGATTATTCCATACCATCAGATGCGAGTAAAACATTTGCTGAAACTCTTAAAAGAGTTGGAGCCACAGCTGAATCAATTATGTACGATGGGAAGACTCATACAGATGTGTTTCTACAGGATCCCATGAGAGGTGGCAAAGATGATATGTTTGAAGATTTAGTAGGATATATCCACTCTGGTGACGCTGATGCCCGTGAGAGAGATGCAAAGGCTCCTCCAAGAAGACGCCTTGTACCTGAATGCATGTTAAAATTGGCTCATAGCGTCAGTCCATTCTAG 1374 0.4731 MPSQILPMPNRPSDPSPPILVKAKDDDDDAANDPSASLLRSFRDLSFKPPLPRASSFTASSRKLNAPSSFHQKRRRRAASQDSFPSLPHDTASSRTSSFGRDVASETFLLTRLGFKMLSYLGVGYKWITRFLALGCYAVLLFPGFIQVGYYYFFSKQIRRSIVYGDKPRNRLDLYLPKNSNGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTISDMIADSSQGISFVCNNIAEYGGDPNRIYLMGQSAGAHIAACAIVEQAIKEAGEGESTSWSLSQIKAYFGLSGGYNLFNLVDHFNSRGLYRSIFLSIMEGEESLRRFSPELMVQDPNIGNAISLLPPIVLFHGTGDYSIPSDASKTFAETLKRVGATAESIMYDGKTHTDVFLQDPMRGGKDDMFEDLVGYIHSGDADARERDAKAPPRRRLVPECMLKLAHSVSPF 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00836 457 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 86 447 - -
Cca11g00836 457 SUPERFAMILY alpha/beta-Hydrolases 152 422 IPR029058 -
Cca11g00836 457 Pfam BD-FAE 172 381 - -
Cca11g00836 457 MobiDBLite consensus disorder prediction 53 67 - -
Cca11g00836 457 Gene3D alpha/beta hydrolase 154 407 IPR029058 -
Cca11g00836 457 MobiDBLite consensus disorder prediction 1 16 - -
Cca11g00836 457 PANTHER ARYLACETAMIDE DEACETYLASE 86 447 - -
Cca11g00836 457 MobiDBLite consensus disorder prediction 84 98 - -
Cca11g00836 457 MobiDBLite consensus disorder prediction 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00836 Cca-Chr11 16255027 16269642 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00836 1 457 Carbohydrate Esterase AT1G26120 66.116 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00836 K15889 - gmx:100790850 761.911