Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00835 ATGAGTGGTGGCAGGAAGAGGAAGCTGCGTTTAAGCAAGATCTACTCATTTGCATGCTGTAAGGCATCCTTCGAGGGGGATCATTCACAGATTGGAGGAAAAGGTTATTCCAGGGTGGTGTTCTGCAATGAGCCAGATAGATTTGAGGATGGTGTTAGAAATTACGCAGACAATTCTGTCAGATCTACAAAATATACTGTTGCTACTTTCTTTCCCAAATCTTTGTTTGAACAGTTTAGGAGGGTGGCAAACTTCTATTTTTTGGTCACTGGCACCTTGGCCTTCACAAAACTTGCTCCATATACTGCTGTTAGTGCTATTCTTCCACTGATTATTGTTATTGGGGCAACTATGGTGAAAGAAGGCATTGAAGACTGGCGCCGGAAAAAGCAGGATATATTGGTGAACAATAGAAGAGTTAAAGTGCATAAAATTGATGGTATTTTTGAATATACTGCATGGAAGAATCTGAGGGTGGGGGATATAGTAAAGGTAGAGAAGGATGAGTTCTTCCCAGCTGATCTCCTATTGCTTTCATCCAGTTATGATGATGCAGTTTGCTATGTTGAGACCATGAATTTGGATGGGGAGACAAATTTAAAGATTAAACAAGGGTTAGAAGTAACTTCTTCTTTACAGGGGGATCTCAACTTCCAAAAATTTAACGCTACAGTCAAATGTGAAGACCCCAACGCAAATTTGTACTCTTTCGTTGGGAGCATGGAGTTTGAAGAGCAAAAATATGCCCTTTCTCCACAGCAACTTCTTCTCCGAGACTCTAAACTTCGCAATACAGACTACATTTTTGGAGCTGTCATTTTCACTGGTCATGACACCAAGGTTATTCAAAATTCTACTGATCCACCTTCAAAAAGAAGCAGAATTGAGAAGAAGATGGACAGAGTCATCTATTTCTTGTTTTGTATTCTATTTCTAATGGCATTCGTGGGATCTATTTTCTTTGGATTTATAACTAAAAATGACCTTCAAAATGGGTCGATGAAAAGATGGTATTTAAGACCAGATGATTCTACTATATTCTTTGATCCGAAAAGATCAGCTGCTGCTGTTTTATTTCATTGTTTGACAGCCTTAATGTTATATGGGTTCTTTATTCCCATCTCTTTGTACGTGTCAATAGAAATTGTCAAAGTCCTTCAGAGCATTTTCATCAATCAAGATATCCATATGTACTACAAGGAAGCAGACAAACCAGCCCGAGCTCGTACTTCAAACTTGAATGAGGAGCTTGGCCAAGTTGATACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTATTGCAGGGGTAGCTTATGGCCGTGGTACTACAGAGGTTGAGAAGGCCATGGATAGAAGAAAAGGTTCACTATCAATTCATGGGCATGATATTGAATTAGAAGAAGATGACATTAGGGGTTCTCTAGATAAAAAGCCACTCATTAAAGGTTTTAATTTTGCTGACGAAAGAATCATAAATGGAAATTGGGTTAATGAACCTCATGCAGATGTTATCCAGAAGTTTTTTCGCCTATTGGCTGTCTGTCATACAGCCATACCAGAAGTGGATGAAGACACAGGAAATGTCTCATATGAGGCTGAATCCCCGGATGAAGCAGCATTTGTGATTGCAGCAAGAGAACTTGGTTTTGAATTCTACAAAAGGGGTCAGACTAGTTTATCAACACATGAGTTGGATCCTGTTTCGGGCAAGAAAGTTGAAAGGAAATACAAACTTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGGAAGATGAAGAAGGGAAAATTTTTCTTCTCTGCAAAGGTGCAGACAGCATCATGTTTGAAAGGCTTGCCAAGAATGGGAGGCAGTTTGAAGAGAAAACCATGGAGCACGTGCATGAGTATGCTGATGCAGGTCTGAGAACCCTTATACTGGCCTATCGTGAACTTGATGCAGAAGAATACAAGGAGTTTGATAATAAATTCTCTAAGGCCAAGAACATAGTTAGTGCTGATCAGGAAATACTGATTGAGGAAGTATCAGATAAGATTGAGAAGAACCTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTGCAAGATGGGGTTCCTGATTGCATCGACAAGCTTGCCCAAGCAGGAATTAAAATTTGGGTTTTGACGGGGGATAAAATGGAGACTGCAATCAATATTGGTTTTGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAGATTATAATTCATTTGGATACTCCAGAAATTCAAGCACTAGAGAAGGATGGGGACAAGATGGCTATTGCCAAAGCATCAAGACAAAGTGTCCTCCTTCAGATATCTGAAGGCGCTGCACAACTCACTGCGTACAGGGGGAGCTCTCAACAGGCATTTTCTCTGATTATTGATGGAAAATCACTTGTTTATGCATTAGAAGATAATATGAAGAACATGTTTCTGGAGCTAGCAATTCGTTGTGCATCTGTTATTTGCTGTCGCTCATCGCCAAAGCAGAAGGCACTGGTCACTAGATTGGTCAAATCTGGAACTGGGAAAACAATTTTAGCTATTGGTGACGGAGCTAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGGATTGGTATAAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCCAGTGATATTGCAATTGCACAATTCCGGTATTTGGAACGATTACTTCTGGTGCATGGACATTGGTGTTACAGGAGGATCTCTTCTATGATATGCTATTTTTTCTACAAGAATATCACATTTGGTTTTACTCTATTCTTATACGAGGTGTATGCATCATTCTCTGGACAACCTGCTTACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTTTCATCATTTCCTGTGATTGCACTTGGGGTGTTTGACCAGGATGTATCATCTCGGTACTGCTTGAAGTTTCCTTTGTTATATCAAGAAGGAGTACAGAATGTCCTTTTCAGCTGGCGTCGAATACTCAGCTGGATGCTTAACGGACTTATCAGTGCCTTAATAATTTTCTTCTTCTGCACAAAATCTATAGAGCTCCAGGCCTTTGATGTGGAGGGGAGAACCGCTGGAAAGGATATACTGGGAGCAACAATGTATACCTGTGTAGTTTGGGTTGTAAACTTGCAAATGGCACTAGCTATAAGTTACTTCACCTTGATCCAACATTTTTTCATCTGGGGTTCCATTGGTTTCTGGTATCTTTTTCTTCTGGTATATGGAGCAATGCCTCCGCACTTCTCTACAAATGCTTACAAAGTCTTCATTGAAGCTCTTGCTCCCTCCCCATCCTATTGGATTGTGACATTCTTTGTGGTGATATCAACCCTTATACCATACTTCTCATACTCGGCAATTCAGAAGCGGTTCTTTCCCATGTATCATGAAATAGTACAATGGATAAGGTATGACGGGAATATTAAGGATCCTGAGTTTTGTGACATGGTGCGGCAGAGATCATTGCGGCCAACAACTGTGGGTGCAACAGCACGCTTAGCTGCTAAGGCTCACCACATTAGAAACAGAAATGTTAACCGTAGATAA 3600 0.4033 MSGGRKRKLRLSKIYSFACCKASFEGDHSQIGGKGYSRVVFCNEPDRFEDGVRNYADNSVRSTKYTVATFFPKSLFEQFRRVANFYFLVTGTLAFTKLAPYTAVSAILPLIIVIGATMVKEGIEDWRRKKQDILVNNRRVKVHKIDGIFEYTAWKNLRVGDIVKVEKDEFFPADLLLLSSSYDDAVCYVETMNLDGETNLKIKQGLEVTSSLQGDLNFQKFNATVKCEDPNANLYSFVGSMEFEEQKYALSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSRIEKKMDRVIYFLFCILFLMAFVGSIFFGFITKNDLQNGSMKRWYLRPDDSTIFFDPKRSAAAVLFHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYKEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGTTEVEKAMDRRKGSLSIHGHDIELEEDDIRGSLDKKPLIKGFNFADERIINGNWVNEPHADVIQKFFRLLAVCHTAIPEVDEDTGNVSYEAESPDEAAFVIAARELGFEFYKRGQTSLSTHELDPVSGKKVERKYKLLNVLEFNSSRKRMSVIVEDEEGKIFLLCKGADSIMFERLAKNGRQFEEKTMEHVHEYADAGLRTLILAYRELDAEEYKEFDNKFSKAKNIVSADQEILIEEVSDKIEKNLILLGATAVEDKLQDGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLDTPEIQALEKDGDKMAIAKASRQSVLLQISEGAAQLTAYRGSSQQAFSLIIDGKSLVYALEDNMKNMFLELAIRCASVICCRSSPKQKALVTRLVKSGTGKTILAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYNVFFSSFPVIALGVFDQDVSSRYCLKFPLLYQEGVQNVLFSWRRILSWMLNGLISALIIFFFCTKSIELQAFDVEGRTAGKDILGATMYTCVVWVVNLQMALAISYFTLIQHFFIWGSIGFWYLFLLVYGAMPPHFSTNAYKVFIEALAPSPSYWIVTFFVVISTLIPYFSYSAIQKRFFPMYHEIVQWIRYDGNIKDPEFCDMVRQRSLRPTTVGATARLAAKAHHIRNRNVNRR 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00835 1199 Pfam Cation transport ATPase (P-type) 534 627 - -
Cca11g00835 1199 CDD P-type_ATPase_APLT_Dnf-like 57 1026 - -
Cca11g00835 1199 SUPERFAMILY Calcium ATPase, transduction domain A 141 283 IPR008250 -
Cca11g00835 1199 Gene3D - 117 286 - -
Cca11g00835 1199 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1144 IPR023298 -
Cca11g00835 1199 SUPERFAMILY HAD-like 419 921 IPR036412 -
Cca11g00835 1199 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Cca11g00835 1199 PRINTS P-type cation-transporting ATPase superfamily signature 866 885 - -
Cca11g00835 1199 Gene3D - 702 906 IPR023214 -
Cca11g00835 1199 SFLD p-type atpase 408 917 IPR044492 -
Cca11g00835 1199 Pfam Phospholipid-translocating ATPase N-terminal 40 106 IPR032631 -
Cca11g00835 1199 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Cca11g00835 1199 Gene3D - 564 701 IPR023299 GO:0000166
Cca11g00835 1199 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 837 948 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cca11g00835 1199 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1194 - -
Cca11g00835 1199 SFLD Haloacid Dehalogenase 408 917 - -
Cca11g00835 1199 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 703 IPR023299 GO:0000166
Cca11g00835 1199 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1151 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cca11g00835 1199 Pfam Phospholipid-translocating P-type ATPase C-terminal 894 1144 IPR032630 -
Cca11g00835 1199 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00835 Cca-Chr11 16183589 16191080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00835 1 1192 Primary Pumps ATPases AT1G68710 74.062 0.0 1897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00835 K01530 - gmx:100781421 2180.6