Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00815 ATGGCACCCTCGTTCCATCAAACTTCAAACACGGTTTGCGTCATGGATGCTTCGGGCCAGTTAGGCACCAGTCTCGTTCACCGGCTGCTTCAAAGGGGATACATCGTCCATGCCTCGGTTCAGTCACATGGTACCTCACAATTCAATGGGATTTCTGCTGATCCCAATAGGCTCAAGATTTTTCGTTCGGACCCTTTTGATTACCATAGCATAATCGATGCTCTTAGAGGCTGCTCTGGCTTGTTCTATGTATTTGAGCCTCCTCAGGATCAACCCAACTATGATGAATACATAGCAGACGTAGAAGTGAGAGCAGCACACAATGTGGTCGAAGCATGCGCTCAAACAGAATCCATAGACAAAGTGGTTTTCACTTCATCCGCAACTGCCGTCGTTTGGAGGGAGGATCGCAAGTCCATGGAATATGACTTGGATGAGAAACACTGGAGTGATGTCAATTTCTGTCGTAAGTTCAAGTTATGGCACGGGATGTCAAAGACGATGGCAGAGAGAACAGCGTGGGCTCTTGCAATGGACAGAGGGGTGAACATGGTGTCCATCAACGCAGGGTTATTGATGGACGGTGATCTGTGCATCAAAAATCCCTACCTCAGAGGAGCGGCGGAGATGTACGAAGATGGTGTATTGGTGACCGTTGATTTACCTATCTTGGTGGATACCCACATCTGCGTCTACGAACATGTCTCTTCCTATGGTCGCTACTTGTGCTTCAACCACGTCATCAACACCCACAACGACGCCGTTCAGCTCGCACACAAGGCAATGCCCATGCCAACCCCTCCTTCCTTGCCTCTAAGCTGTGACCCAGGGAAGGATTTTATCCGACAAAGAATAACCAACAAGAAATTGAACAAACTGATGGTGAATTTTGTGGGTTGA 900 0.4822 MAPSFHQTSNTVCVMDASGQLGTSLVHRLLQRGYIVHASVQSHGTSQFNGISADPNRLKIFRSDPFDYHSIIDALRGCSGLFYVFEPPQDQPNYDEYIADVEVRAAHNVVEACAQTESIDKVVFTSSATAVVWREDRKSMEYDLDEKHWSDVNFCRKFKLWHGMSKTMAERTAWALAMDRGVNMVSINAGLLMDGDLCIKNPYLRGAAEMYEDGVLVTVDLPILVDTHICVYEHVSSYGRYLCFNHVINTHNDAVQLAHKAMPMPTPPSLPLSCDPGKDFIRQRITNKKLNKLMVNFVG 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00815 299 PANTHER CINNAMOYL-COA REDUCTASE-LIKE SNL6 4 297 - -
Cca11g00815 299 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 297 - -
Cca11g00815 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 268 IPR036291 -
Cca11g00815 299 Gene3D - 4 299 - -
Cca11g00815 299 Pfam NAD(P)H-binding 17 133 IPR016040 -
Cca11g00815 299 CDD FR_SDR_e 12 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00815 Cca-Chr11 15501406 15507990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00815 10 298 Monolignol Biosynthesis Gene Families AT5G58490 32.268 3.75e-44 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00815 - - gmx:100783579 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00815 11 15501406 15507990 Cca11g00815 11 15501406 15507990 ECH