Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00783 ATGAAGGCCCAGTCCGAGATCTGCGCCGCCTTCTTGGGCCGGACGCGAGCCACCAAGAACCGTCCCGACCAGCCGCTCCAGCCCGCCTCGGCCGGCAAGCGCTCCAGGAAGGTCGAGGAACCCAAACCCCCCGAGGACTTGGTTTTCCAGCAACAAAGTGTCGCCGCCGGTGGTGTGGATGGTGGTGGAGATGAACGGCAACAAAGTCCCGTTCACGGCATCTCCCTCAAGCTCCAGGAGGAGGAGCGCGAGCACCGCATGGACTTTGTTCCGAGGTTTCTGCGATCAACACGGACCACATCGAGGTCGACAAGGAGTTAA 321 0.6199 MKAQSEICAAFLGRTRATKNRPDQPLQPASAGKRSRKVEEPKPPEDLVFQQQSVAAGGVDGGGDERQQSPVHGISLKLQEEEREHRMDFVPRFLRSTRTTSRSTRS 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00783 106 MobiDBLite consensus disorder prediction 76 92 - -
Cca11g00783 106 MobiDBLite consensus disorder prediction 12 106 - -
Cca11g00783 106 Pfam Ribosomal S17 67 93 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00783 Cca-Chr11 14569997 14570317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00783 67 91 Cytoplasmic Ribosomal Protein Gene Family AT2G05220 84.000 2.41e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00783 K02962 - ccaj:109790105 181.8