Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00776 ATGGCTAAAACACAAACTCCTTTTCTTGCTCTCATGATTTTCTTCTTTTTTGTGTCGTTACTCATCACTGTGAAGTCAGGGTCAGTTTCATTCAGCTTCTCCAAATTCGGAGCGGGACAAGAATCCGAAATTGGTTACCTTGGCGATGCGCGTCCATTAGGTGGTGCAATACAATTGACAAGAAGAGATAATGGAATATTTGGCATTCCCATTCTTCGCCAAAACAGCGTTGGTCGTGCACTTTACATTCCACCCATTCGCCTTTGGGACAAAACCACAGGCAAACTCGCTGACTTCGAAACTCAGTTCTCCTTTGTGGTTGATACCCTTGCTTCACGAATCCACGCTGATGGCTTCTCCTTTTTCATCTTACCATTCGAAGACCCAAGAATTCCCAAAAACTCATCTGGGGGATACCTTGGACTCTTCAGTCCCGAAACTGCTTTCAACTCAAACAAAAACCAAATTGTGGCTGTTGAATTTGACAGCTTCGGGAACGAGTGGGATCCCAAACCTGTAGCCGTTGCTCCTCACATTGGAATTGATGTTAACTCTCTTGAATCCGTGAAAACTACGGATTGGCCTATTAATTCTGTGCCTCGAGGTTTAGTTGGAAATGCTTTCATTAGTTATGATTCCAAGACTAAAAAATTGAGTGTCGCGGTTGGTTATGTTACTCCAGCACCCGTTATTGTTGATCTCTCACAAACCATTGATTTGAGGGATGTTCTGCCAGAATGGGTTAGAATTGGTTTCTCTGCTGCCACGGGTGATAACGTTGAAACGCATGACATTCTTTCGTGGTCTTTCACTTCACGTGTTTAG 825 0.4364 MAKTQTPFLALMIFFFFVSLLITVKSGSVSFSFSKFGAGQESEIGYLGDARPLGGAIQLTRRDNGIFGIPILRQNSVGRALYIPPIRLWDKTTGKLADFETQFSFVVDTLASRIHADGFSFFILPFEDPRIPKNSSGGYLGLFSPETAFNSNKNQIVAVEFDSFGNEWDPKPVAVAPHIGIDVNSLESVKTTDWPINSVPRGLVGNAFISYDSKTKKLSVAVGYVTPAPVIVDLSQTIDLRDVLPEWVRIGFSAATGDNVETHDILSWSFTSRV 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00776 274 Gene3D - 27 274 - -
Cca11g00776 274 PIRSF Plant_L_lectin 1 274 IPR016363 GO:0030246
Cca11g00776 274 ProSitePatterns Legume lectins beta-chain signature. 157 163 IPR019825 -
Cca11g00776 274 PANTHER LECTIN 1 274 - -
Cca11g00776 274 CDD lectin_legume_LecRK_Arcelin_ConA 29 273 IPR001220 GO:0030246
Cca11g00776 274 Pfam Legume lectin domain 29 272 IPR001220 GO:0030246
Cca11g00776 274 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 1 274 - -
Cca11g00776 274 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 273 IPR013320 -
Cca11g00776 274 ProSitePatterns Legume lectins alpha-chain signature. 244 253 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00776 Cca-Chr11 14416695 14417519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00776 12 274 Receptor kinase-like Gene Family AT5G10530 40.672 1.11e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00776 - - gmx:100786214 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00776 11 14416695 14417519 Cca06g00922 06 22805548 22806390 PCT