Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00774 ATGGACATTGCGTCTCTCGAGAAGTTTCTTCAAGAGAGGATTAAGGTCGGTGGCAAGGCCGGCGCGCTCGGCGACACCGTCACGTCGCACGTGGAAAAAAATGACACATTTTCCCTTTCAAATCATTTGGATGGTGGAAGTTTTGCCAAACTTTTTGTTGGATCTGTTCCTCGAACAGCCACTGACGCAGATGCCCTTGCAAATCTTTCTAAGAAGCTATGTGGTTGTTTTACAATTGGAAATGCACTGGTTTAG 255 0.4627 MDIASLEKFLQERIKVGGKAGALGDTVTSHVEKNDTFSLSNHLDGGSFAKLFVGSVPRTATDADALANLSKKLCGCFTIGNALV 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00774 84 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 40 - -
Cca11g00774 84 Gene3D - 1 47 IPR038526 -
Cca11g00774 84 Pfam Ribosomal L22e protein family 1 39 IPR002671 GO:0003735|GO:0005840|GO:0006412
Cca11g00774 84 PANTHER 60S RIBOSOMAL PROTEIN L22 1 40 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00774 Cca-Chr11 14367408 14368547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00774 1 34 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 82.353 1.76e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00774 K02891 - qsu:111993050 60.4622