Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00739 atgaaacagaaaccagatacagacacagaCCTCAACAGAACCCTTGGCGGCTCCGATTCCCTCCTCCGTCCCTGCCTTTCCCTTCTCACGCGCCGCGACTTCACCGCGTGCCGCGACTCCGCCACTCGCCTCCCAAGATCCGACCCCGACGTCGCCCTCCAGCTCGACCAAATCATCGCCGTCGCCGAAGTCCTCGCGGCCGCCACGCCCCGCCACGACCACCGCCTGGACTGGTACTCCATCCTGCGCCTCCCGCCCAACGGCGCCTCCGCCGCGGAGCGCGACACGGTGCGGCGGCAGTTCAAGACCCTGGTGCGGCTCCTGGACCCCAACAAGAACACCTTCCCTTTCGCCGCAGAGGCCCTCATGCGCGTGCGCGAGGCCTGGTCCGTGCTCTCCGACCCCGAGCGCAAGGCCCGCTTCGACCGCGAGATCCAGGGCGCCACGGCGTCGTTTTGGACAATGTGCCCTTACTGCTGGTTCCTGCACGAGTACGAGAGCCGCTACGAGGACTGCACTCTGCGCTGCGCCAACTGCCGGAAGACCTTTCACGGAGCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCGCCGCTGGAGTCGGTGGTGGCGGGGAAGGACGAGTACTACTGCTACCACGTCAGCTTGCCTATGAGGTACCCTGTTGGCGAACGGTGTCGTTTAGGGGATGA 738 0.584 MKQKPDTDTDLNRTLGGSDSLLRPCLSLLTRRDFTACRDSATRLPRSDPDVALQLDQIIAVAEVLAAATPRHDHRLDWYSILRLPPNGASAAERDTVRRQFKTLVRLLDPNKNTFPFAAEALMRVREAWSVLSDPERKARFDREIQGATASFWTMCPYCWFLHEYESRYEDCTLRCANCRKTFHGAXXXXXXXXXXXXXXXXXXXXXXXXPPAAGVGGGGEGRVLLLPRQLAYEVPCWRTVSFRG 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00739 245 CDD DnaJ 77 134 IPR001623 -
Cca11g00739 245 Pfam DnaJ domain 77 142 IPR001623 -
Cca11g00739 245 SUPERFAMILY Chaperone J-domain 70 145 IPR036869 -
Cca11g00739 245 ProSiteProfiles dnaJ domain profile. 77 145 IPR001623 -
Cca11g00739 245 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 8 188 - -
Cca11g00739 245 SMART dnaj_3 76 137 IPR001623 -
Cca11g00739 245 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 8 188 - -
Cca11g00739 245 Gene3D DnaJ domain 71 152 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00739 Cca-Chr11 13104245 13104982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00739 8 186 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 4.85e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00739 - - gmx:102659715 261.922