Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca11g00724 | ATGGAAGATGCACTGCGCCGTCTCAACGGAATGACCCCCATTCAAGAACCCGACGCCGTCGCCGACCACCCGCACCCCAAGAAGTCCGCCGCCAAGCGCACTGTGCGCGAGGCTCCCACCTCCGGCACTGCCATGCGCTACCGCGGCGTCCGACGCCGCCCCTGGGGCCGCTACGCCGCCGAGATTCGCGACCCGCAGTCGAAGGAGCGCCGCTGGCTGGGCACCTTCGACACGGCAGAGGAGGCCGCCTGCGCCTACGACTGCGCCGCCCGTGCCATGCGCGGCGTCAAGGCCCGCACCAACTTCGTGTACCCCGACGCTCCAGACCCTCACCTCTTCCAACCCTACAATGTTCCTAAGCACTGCCACGTCACCAGGTTCGTCCCGAACCACAGCCTCGGAGGTGCCGACTTCtcatcatcatcatcctccactcatcacaatcaCAACCCTTCTTCTCTCAACATGCTTCTCTTTCGTGACTTCCTCAACTCTTCTTCTTCTCAGCATTTTCATAGTAAGACTGCGCTTGCGCCTGCTAGTAGCTATGTAAACTCTTCTTCGTTACCTTCTCCAACGGGTAACTATGCTAATAACATTGCTGGTAACTCCGGTGTTGTTAGCTTCAATCACGCAACAGAAGTTGCTGAGTCTATTGATGAAGACTTGGGGTTGGGTTTTTTCCCGCGAGAGTCTTCTGATTCTGGGTTATTGGAAGAGATAGTCCATAAGTTCTTGCCAAAAACCAAGCCCAATAAGACTGGTGAAACTTCGCTGAGACATGAGACTTTGTCCATTTCTGAACCATTTCCTCAAACTGTGTCTGATTACGTGGCTGTTTCTGCTACTAAGGGTTATGGTGATGCCAAAATGAGGTTTCCTAAAATCGATGGTTTTGGTGTGTCTTATGATTCTCCCATGCAGCAATTTGATACCCTTAATGGGTTTAACCCCGTGCAGGGTGTGACTATTGAGAGAGACAACAACAGCAACAACTACCAGTATATGATGAATCATTTCCCAGGATGTTCCAACTTGGAAGACATTCTTCAGTATCCAGAACTTTTTAATTCCTTTGCAGCCAGGATGCAGAATGCTTAA | 1101 | 0.5086 | MEDALRRLNGMTPIQEPDAVADHPHPKKSAAKRTVREAPTSGTAMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGVKARTNFVYPDAPDPHLFQPYNVPKHCHVTRFVPNHSLGGADFSSSSSSTHHNHNPSSLNMLLFRDFLNSSSSQHFHSKTALAPASSYVNSSSLPSPTGNYANNIAGNSGVVSFNHATEVAESIDEDLGLGFFPRESSDSGLLEEIVHKFLPKTKPNKTGETSLRHETLSISEPFPQTVSDYVAVSATKGYGDAKMRFPKIDGFGVSYDSPMQQFDTLNGFNPVQGVTIERDNNSNNYQYMMNHFPGCSNLEDILQYPELFNSFAARMQNA | 366 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca11g00724 | 366 | ProSiteProfiles | AP2/ERF domain profile. | 46 | 103 | IPR001471 | GO:0003700|GO:0006355 | |
Cca11g00724 | 366 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Cca11g00724 | 366 | SUPERFAMILY | DNA-binding domain | 46 | 103 | IPR016177 | GO:0003677 | |
Cca11g00724 | 366 | SMART | rav1_2 | 46 | 109 | IPR001471 | GO:0003700|GO:0006355 | |
Cca11g00724 | 366 | Gene3D | AP2/ERF domain | 45 | 104 | IPR036955 | GO:0003700|GO:0006355 | |
Cca11g00724 | 366 | MobiDBLite | consensus disorder prediction | 20 | 34 | - | - | |
Cca11g00724 | 366 | Pfam | AP2 domain | 46 | 95 | IPR001471 | GO:0003700|GO:0006355 | |
Cca11g00724 | 366 | PRINTS | Ethylene responsive element binding protein signature | 47 | 58 | IPR001471 | GO:0003700|GO:0006355 | |
Cca11g00724 | 366 | PRINTS | Ethylene responsive element binding protein signature | 69 | 85 | IPR001471 | GO:0003700|GO:0006355 | |
Cca11g00724 | 366 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 1 | 366 | - | - | |
Cca11g00724 | 366 | CDD | AP2 | 46 | 102 | IPR001471 | GO:0003700|GO:0006355 | |
Cca11g00724 | 366 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE | 1 | 366 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca11g00724 | Cca-Chr11 | 12520039 | 12521323 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca11g00724 | 1 | 248 | AP2-EREBP Transcription Factor Family | AT1G24590 | 38.406 | 9.00e-43 | 149 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Cca11g00724 | AP2 | 6.9e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca11g00724 | - | - | gmx:102661952 | 396.741 |