Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00662 ATGGATCTGGAACATGGGATTCTTCATAACTCTGCTAAGAGGAAAGAATCATGGAAAACGGTTCTGACTCTGGCATATCAGAGTCTTGGAGTTGTGTATGGAGAGATAAGCACTTCACCACTCTACGTGTACCGGAACACATTTGCTGGAGATATTGGTCACTCAGAGACGAATGAAGAGATTTATGGTGTTTTGTCTTTGGTGTTCTGGACTCTTACATTGGTGCCTTTGTTGAAGTATGTGTTCATAGTGCTGAAAGCTGATGACAATGGTGAAGGTGGCACGTTTGCACTCTACTCTTTGCTGTGTCGCCATGCCAAAGTTGGCTTGTTGCCTAATTGCCAATTGGCAGATGAGGAGCTCTCGGAGTACAAGAAGCATACCTATGGTGTGGCACCAGAGAGAAGCTTTCCCTCAAGGCTCAAGTCCTTGTTGGAGAGGCACAAGGTCTTGCAGAGGATTTTGCTGGTTTTGGCTTTGTTAGGGACTTGCATGGTGATTGGTGTTGGAGTCCTTAAGCCTGCTATTTCTGTTTTCTCAGCAGTGTCTGGCCTTGAGCTTTCAATGTCGAAGGAACATCATAGATATGTAGAAGTTCCATGTGCATGCATCATAATAATAGGCTTGTTTGCCCTTCAACGTTATGGCACACACAGGGTTGGTTTCTTGTTTGCGCCCATAGTTTGTATATGGCTCTTCTGCATCAGTGCCATTGGTATATATAATGTCTTTTACTGGAACCCTCATGTGTACCAAGCACTCTCTCCATATTATGTTTTCCAATTTTTAAGGAAGACTAGGAGAGGAGGTTGGATGGCCCTTGGTGGAATTTTGCTGTGCATAACAGGATCAGAAGCCATGTTTGCTGGTCTTGGGCACTTTTCTCAGCTATCAATCAAGATTGCTTTCACCTCTTTGGTTTATCCATCTTTAATTCTTGCGTATATGGGGCAAGCTGCATACTTTTCTAGACATCATGATGTTGAGCAAGAGTATCACTTTGGTTTTTATGTATCTGTACCAGAGAAGTTGAGGTGGCCTGTTCTGGTGatagccatacttgctgcagttgtgggaagccaatccatcatcactggaactttctcaatcatcaggcaatgctctgcattaagttgcttcccaagagttaaagttgttcacacttcatccaaaattcatggacaagtatatatccctgagatcaactggttgttgatgctcttgtgtttggctgtaactattggtttcagagacacaaagCTTATGGGTAATGCATCAGGTTTGGCAGTTGTCTCAGTGATGCTGGTCACCTCATGTTTAATGTCAGTGGTCATTGTAATTTGCTGGCACAAGAATGTTCTGGTTGCAATTGGGTTTGTTCTCTTCTTTGGCACTATTGAGGTTCTCTTCTTCTCAGCTTCTGTGATCAAGTTCTTTGAAGGAGCATGGGTGCCGGTTGCTTTGGCATTTGTGTTTCTAACCGTCATGTGTGTGTGGCACTATGGAACTCTCAAAAAGTACGAATTCGATGTTCAAAACAAGGTCTCAATAAGCTGGCTACTTAGCCTTGGTCCTAGCTTAGGCTTTGCTAGAGTACGTGGCATTGGCCTTGTGCACACAGAACTAGTGTCAGGAATCCCTGCAATTTTCTCCCACTTTGTGACCAACCTACCAGCATTCCACCAGGTCCTTGTTTTCCTATGCATCAAGCACGTGCCAGTTCCGCATGTTAGACCCGAGGAAAGGTTCCTAGTTGGTCGAGTTGGTCCAAGGGATTTCAGAGTCTACAGGTGCATAGTGAGGTATGGATACCATGATGTGCACAAAGATGACAATGAGTTTGAGAAAGATCTTGTGTGCAGCATAGCAAAGTTCATACAAGCAGGAAGTGGTGGACTCAACTCTTCAAACGATGAGCCTGAAAAGGATGGGAAAATGACAGTTGTTGGAACCTGTTCTAGTTCTAGCCACCCCATTTTGGTGAGTGAGCATGAAAATGATGTGGACTTAGCTGAGACATCAACAAAGTCACACAAAGTGGTCCAACCAAAGAAAAGGGTTAGGTTTGTTGTGCCTGAGAGTCCAAAGATTGATGTTGGTACAATGGAGGAGTTGAAGGATCTCATGGAAGCAAGGGAAGTTGGGCTGGCTTACATCATAGGACAGTCCTACATGAGAGCCAAACCAGGGTCCAGTCTGCTTAAGAAGATAGTCATTAATTTTGGGTATGAATTCTTAAGGAAGAATAGCAGGGAACCCTCCTATGTACTTAGTGTTCCTCATGCATCATCTTTGGAAGTTGGGATGATGTACCAAGTTTAA 2322 0.4009 MDLEHGILHNSAKRKESWKTVLTLAYQSLGVVYGEISTSPLYVYRNTFAGDIGHSETNEEIYGVLSLVFWTLTLVPLLKYVFIVLKADDNGEGGTFALYSLLCRHAKVGLLPNCQLADEELSEYKKHTYGVAPERSFPSRLKSLLERHKVLQRILLVLALLGTCMVIGVGVLKPAISVFSAVSGLELSMSKEHHRYVEVPCACIIIIGLFALQRYGTHRVGFLFAPIVCIWLFCISAIGIYNVFYWNPHVYQALSPYYVFQFLRKTRRGGWMALGGILLCITGSEAMFAGLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYFSRHHDVEQEYHFGFYVSVPEKLRWPVLVIAILAAVVGSQSIITGTFSIIRQCSALSCFPRVKVVHTSSKIHGQVYIPEINWLLMLLCLAVTIGFRDTKLMGNASGLAVVSVMLVTSCLMSVVIVICWHKNVLVAIGFVLFFGTIEVLFFSASVIKFFEGAWVPVALAFVFLTVMCVWHYGTLKKYEFDVQNKVSISWLLSLGPSLGFARVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKHVPVPHVRPEERFLVGRVGPRDFRVYRCIVRYGYHDVHKDDNEFEKDLVCSIAKFIQAGSGGLNSSNDEPEKDGKMTVVGTCSSSSHPILVSEHENDVDLAETSTKSHKVVQPKKRVRFVVPESPKIDVGTMEELKDLMEAREVGLAYIIGQSYMRAKPGSSLLKKIVINFGYEFLRKNSREPSYVLSVPHASSLEVGMMYQV 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00662 773 PANTHER POTASSIUM TRANSPORTER 6 1 773 - -
Cca11g00662 773 Pfam K+ potassium transporter 26 606 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca11g00662 773 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 773 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca11g00662 773 TIGRFAM kup: potassium uptake protein 24 773 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00662 Cca-Chr11 10943763 10949300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00662 1 773 Inorganic Solute Cotransporters AT1G70300 71.975 0.0 1170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00662 K03549 - gmx:100784861 1414.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00662 11 10943763 10949300 Cca11g00662 11 10943763 10949300 ECH
Cca06g00808 06 21043009 21048202 Cca11g00662 11 10943763 10949300 PCT