Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00615 ATGGAACAATTTAGACAGATTGGTGAGGCACTAGGGAGTTTGAAATCTGTGATGGTATTCCGGGACAGCATTCAAATCAATCAGAGGCAATGTTGTTTGATGTTTGATGTGTTCAACTTTGCATATGAGTGTATTGCAGATGAGATTATACAAAACCTGAAATTTGAAGAGAAGACTGGGAAGTGGAAGGTTCTTGAACAGCCCTTGAGAGAGATCCATAGGATTTTTAAAGAAGGAGAATCCTACGTTAGGCATTGCATGGAAACAAAAGATTGGTGGGCTAAGGCCATTACCATGTGCCACAATAGAGACTGTGTTGAGTTTCATATACATAACTTGCTTTGTTGCATGCCTGTTGTGATTGAAGCCATAGAGTCTGCAGGAGAAACATCAGGGTGGGATCAGGATGAGATGCAAAGGAAGAGGCTTATAAACTCCAACAAGTACAGGAAAGAATATAGAGACATGAAACTTTTCCAGTGGAAATTTGGGAAGCAGTATCTCATCACTCAGGACTTATGCAACCGGTATGACACAGTTTGGAAGGAAGATAGATGGTTCCTTTACAACAAAATTCATGAAAAGAAAGTGGCAGGTATAACAAAGCACGAGAAGAAATTGATAGATTTCCTCTTGAGGATTTTGGAAAGATCAGAATCATTGGAAGAGAGGCTCCTCCCAAGCTCAATATTGATTGGATCCAAGGACTACCAGGTGAGGAGAAGAATGGGGAATATGAGCCAGTACAAGGAGATTTCATGGTTAGGTGAAAGCTTTGTGATAAGACATTTTTCTGGGGATATTGAGGCTTTGGTACCTGAGATCAGAGAACTTTTGTCTCTTTCACATCCAAATATAATGGACTACCTTTGTGGTTTCACTGATGAGGAGAAGAAGGAGTGCTTTTTGTTGATGGAACTGATGAGCAAAACCCTTTCCACACACATCAAAGAGATTCATGGTCCACGGAGGCGAATACCGTTCTTGCTTCATGTGGCAGTTGATATTATGCTTCAGATTGCCAGGGGAATGGAGTATATGCATTCAAAGAAAGTATATCATGGAGAACTAAACCCTTCAAACATTCTTGTTAAGTCTAGAGGTACATCCCCAGAAGGTTACTTGCATGCCAAGGTATCTGGGTTTGGCCTATCTTCTGTTAAGGACTTGAACCAAAGAGGGAACACAAACACCAACACAAACACAAATCAGAATGGAACTCTCCCTTTCATATGGTACTCTCCTGAAGTGCTTGAAGAGCAAGAACAATCAGGGGGTGCAGCAAACTCCAACTCCAAGTACACAGAGAAATCTGATGTGTACAGTTTTGGAATGGTTTGCTTTGAGCTTCTAACTGGCAAAGTCCCTTTTGAGGATAGTCATCTCCAAGGGGAGAAAATGAGCAGAAACATAAGGGCAGGAGAGAGGCCACTTTTCCCACTGAATTCACCAAAGTATGTTATTAACTTGACAAAGAGATGTTGGCATATTGATCCCAATCAACGTCCAACTTTCTCCACCATATGTAGAGTTCTTCGTTATATAAAAAGGTTTCTTGCAATGAATCCTGGTTACATTAATCATCCAGAACAACCAGTGCCACCAGTAGATTATTGTGATATAGAGGCAGTGCTTCTGAGGAAGTTTCCTTCTTGGGGAAGTTCTGAATCATCACCAGTGTCAATAATTCCATTTCAAATGTTTGCCTATCAAGTTATAGAAAGGGAAAAGATAAGTACATGCCTTAAGGATAACTCCGAGTCTGGAAGTGAGACTTCAGCATGTGGTGATGAACTTGTTACTTCTGGGGATGAGCCATTTCCTTCCACAAATGAAAGGAAGTCTTTGCTTGGACATGACAGTATCATGAACAGGAAAATTACATTGACCAGAAAATCTCTTGATTTGAAATTCACCAAACAACCGAGTACACCGAAAGGGAAATCAGCCAGACCTCCACAAATGTCCCCTCGTGCACGAAGTCTGAGGCTTAATTCAGATAACCGCATAATATCAAGTCCAAGGGCAATAAGAAGAGTATCTTCTGACTGCAGTCTCAGGAGCCTGGATGATGTACAGGAAGTTATGCTGTAA 2094 0.4112 MEQFRQIGEALGSLKSVMVFRDSIQINQRQCCLMFDVFNFAYECIADEIIQNLKFEEKTGKWKVLEQPLREIHRIFKEGESYVRHCMETKDWWAKAITMCHNRDCVEFHIHNLLCCMPVVIEAIESAGETSGWDQDEMQRKRLINSNKYRKEYRDMKLFQWKFGKQYLITQDLCNRYDTVWKEDRWFLYNKIHEKKVAGITKHEKKLIDFLLRILERSESLEERLLPSSILIGSKDYQVRRRMGNMSQYKEISWLGESFVIRHFSGDIEALVPEIRELLSLSHPNIMDYLCGFTDEEKKECFLLMELMSKTLSTHIKEIHGPRRRIPFLLHVAVDIMLQIARGMEYMHSKKVYHGELNPSNILVKSRGTSPEGYLHAKVSGFGLSSVKDLNQRGNTNTNTNTNQNGTLPFIWYSPEVLEEQEQSGGAANSNSKYTEKSDVYSFGMVCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFPLNSPKYVINLTKRCWHIDPNQRPTFSTICRVLRYIKRFLAMNPGYINHPEQPVPPVDYCDIEAVLLRKFPSWGSSESSPVSIIPFQMFAYQVIEREKISTCLKDNSESGSETSACGDELVTSGDEPFPSTNERKSLLGHDSIMNRKITLTRKSLDLKFTKQPSTPKGKSARPPQMSPRARSLRLNSDNRIISSPRAIRRVSSDCSLRSLDDVQEVML 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00615 697 Pfam Protein tyrosine and serine/threonine kinase 268 511 IPR001245 GO:0004672|GO:0006468
Cca11g00615 697 PANTHER SERINE-THREONINE PROTEIN KINASE 1 638 - -
Cca11g00615 697 Gene3D Transferase(Phosphotransferase) domain 1 244 522 - -
Cca11g00615 697 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-LIKE 1 638 - -
Cca11g00615 697 ProSiteProfiles Protein kinase domain profile. 226 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00615 697 MobiDBLite consensus disorder prediction 634 650 - -
Cca11g00615 697 Pfam Protein of unknown function (DUF1221) 21 234 IPR010632 -
Cca11g00615 697 MobiDBLite consensus disorder prediction 634 660 - -
Cca11g00615 697 SUPERFAMILY Protein kinase-like (PK-like) 265 535 IPR011009 -
Cca11g00615 697 MobiDBLite consensus disorder prediction 583 597 - -
Cca11g00615 697 MobiDBLite consensus disorder prediction 583 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00615 Cca-Chr11 10057524 10062004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00615 274 512 MAP Kinase Kinase Kinase AT5G58950 28.099 3.49e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Cca11g00615 PK_Tyr_Ser-Thr 2.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00615 - - gmx:100813704 1176.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00615 11 10057524 10062004 Cca11g00615 11 10057524 10062004 ECH