Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00606 ATGGAGGCCCTCAATGCTGCTGGCTTGACCCCTCTTTCTGTTCTCTCTGACacaaccacaacaagaaaacaaccatcaacaTCTGCATGCAAATTCTCAAACTTTTCCACCTTTGGCAACAAGAAACAACACGCTTTGCTGAAAACTCTGCATGGGGGGCTATTTCTGGCGGCTTCAGTTGCAAGTGGTGGAGCTGCCTCAGCTTTGTCGTACGAGGAAGCACTGGGGCAATCTTTGAGCCTCCCTAGTTCTGGGGACTTTGACTTGAACGGGTTTGTGGAGAGTGTCACTAGCATTGTAGCTGAGAACCCTGCAATTGTTGCTGGAGGAGTGGCTGTTTTGGCTGTGCCATTGGTTTTGTCTCAGGTTTTTAAGAAGCCTAAGGCATGGGGTGTTGAGTCTGCCAAGAATGCATATGCAAAACTTGGGGCTGATGAGAAGGCTCAGTTGCTTGATATAAGAGCACTTGTGGAGATTAGGCAAGTGGGGACCCCGGATGTTGGGGGTTTGAGGAAGAAAGCAGTGTCAATAGCTTATAAGGGTGATGATAAGCCAGGGTTCTTGAAGAAGCTTGCATTGAAGTTTAAGGAGCCACAGAATACCACACTGTTTATTCTGGACAAATTTGATGGGAACTCTGAACTGGTTGCAGAGTTGGTTACCGTTAATGGATTTAAAGCCGCTTATGCAATTAAGGATGGTGCAGAAGGACCACGAGGATGGGTGAATAGTGGTCTTCCATGGATAGCACCGAGGAAAACATTGAGTTTGGACAATCTGGCAGATGCTATCAGTGACGCAATTGGAGATTCCTCTGATGGCTTGGCTGTTACTCTTGGGATTGCTGCAGCTGCTGCTGGACTGAGTCTATTAGCTTTTTCTGAGATAGAATCAATCCTCCAAGTTGTAGGGTCAGCTGCACTCATTCAGTTTGCAAGCAAGAAGCTTTTATTTGCTGAGGATCGAAAGCAAACGGTGCAACAATTTGATGAGTTCTTGAACACCAAGGTTGCCCCTAAAGAACTTGTTGATGAAATAAAGGAAATTGGAAAGGCTCTTCTACCAGCATCTACCAATAATAAGGCTCTTCCTGCTCCAGTAGACCAAACTTCAGAGCTTGCTACAGCTGATAGCACTGTACAGACAGCAGTAGCTACTCCCGAGTCCAAAGTGGATGCAGCAGCTCCTGAAATAAACTCAGTGCCCAAAACTGAAGCCAAGGCAGAAGAATCACTTCCTGCACCACCAAGACCACTTTCACCATACCCATATTATCCAGATTTCAAGCCTCCAACATCTCCTACCCCTTCACAGCCCTAG 1320 0.4568 MEALNAAGLTPLSVLSDTTTTRKQPSTSACKFSNFSTFGNKKQHALLKTLHGGLFLAASVASGGAASALSYEEALGQSLSLPSSGDFDLNGFVESVTSIVAENPAIVAGGVAVLAVPLVLSQVFKKPKAWGVESAKNAYAKLGADEKAQLLDIRALVEIRQVGTPDVGGLRKKAVSIAYKGDDKPGFLKKLALKFKEPQNTTLFILDKFDGNSELVAELVTVNGFKAAYAIKDGAEGPRGWVNSGLPWIAPRKTLSLDNLADAISDAIGDSSDGLAVTLGIAAAAAGLSLLAFSEIESILQVVGSAALIQFASKKLLFAEDRKQTVQQFDEFLNTKVAPKELVDEIKEIGKALLPASTNNKALPAPVDQTSELATADSTVQTAVATPESKVDAAAPEINSVPKTEAKAEESLPAPPRPLSPYPYYPDFKPPTSPTPSQP 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00606 439 MobiDBLite consensus disorder prediction 384 439 - -
Cca11g00606 439 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 132 249 IPR036873 -
Cca11g00606 439 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 439 IPR044240 -
Cca11g00606 439 MobiDBLite consensus disorder prediction 414 439 - -
Cca11g00606 439 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 439 - -
Cca11g00606 439 Gene3D - 129 259 IPR036873 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00606 1 429 Sulfurtransferasese or Rhodanese AT4G01050 56.596 1.02e-154 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00606 K17525 - gmx:100810796 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00606 11 9808768 9817058 Cca11g00606 11 9808768 9817058 ECH