Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00542 ATGACAACTCACATTGATAACTTGTGGGTGTTAGCCTTGGCCTCCAAATGCACACAGGAGAACATTGCATGGTCACTTTTGATCATGGTCTCACTCTGGCTCACCATGACCTTGTTCTACTGGTCTCACCCAGGTGGTCCAGCTTGGGGCAAGTACCACTCCACATGGAGGAAAAACACCAACAACCTTAACCATGTCTCAGATAATAATAAAATGATTCCTGGTCCCAAAGGCTACCCCATACTAGGTAGCATGAGGCTCATGGCCTCGCTAGCGCACCACCGTATTGCGGCTGCGGCCAAGGCATGCAACGCCACCAGGCTCATGGCCTTCAGCCTCGGCGACACACGTGTCATAGTCACGTGCCACCCCGACGTAGCCAAGGAGATTCTCACCAGCTCTGTTTTCGCGGATCGCCCCATCAAGGAATCCGCTTACAGCCTTATGTTCAACCGTGCCATCGGCTTTGCCCCCTACGGTGTTTACTGGCGCACTCTCCGCCGTATCGCCGCCACGCACCTCTTCTGCCCCAAGCAAATCAAGGCCTCTGAGTTTCAACGTGCCCAAATCGCCGTCCAGCTCACCGACTCATTCCGAAACCGCCACGCCGGCTTTTGCGTTCGCCAGGCGCTTAAGAAAGCTTCGCTCAATCACATGATGTGGTCGGTGTTCGGTCAGAGGTACAACCTGGATGAAACAAACACCGGAATGGAGGAGCTATCCCGGTTAGTGGAGCAAGGGTACGACCTTTTGGGTACCCTTAATTGGGGTGACCATATCCCTTTTCTCAGAGACTTTGACCTACAAAAAATCCGGTTCATTTGTTCAAAGCTCGTCCCCAAAGTGAACCGGTTCGTTGGTTCAATCATCGCCGACCACCAAGCCGACATAACCCAAACCAACCGGGATTTCGTTCATGTTTTGCTCTCTCTCGAAGGTCCAGATAAATTGTCTCACTCCGACATGATTGCTGTCCTCTGGGAAATGATATTTAGAGGGACCGACACGGTGGCGGTTTTGATCGAGTGGATACTAGCGAGGATGGTGCTTCATCCCGAGGTACAAAGGAAGGTGCAACAGGAGCTTGACGCGGTGGTTGGGTCACGCGTTTTAACTGAGGAGGACGTGGCGGCGACGGTGTACCTGCCGGCGGTGGTGAAGGAGGTTCTGAGGGTGCACCCTCCGGGCCCACTTCTCTCGTGGGCCCGTTTAGCCATCACTGATACGACCATTGATGGGTATCACGTGCCCGCTGGGACCACCGCCATGGTTAATATGTGGGCCATAGGGCGGGACCCGAGCGTGTGGGTGGACCCACTTCAGTTCAAGCCCGAGAGGTTCCTTAACGGGGAGTCCGAGTTTTCTGTTTTTGGGTCGGATCTGAGACTCGCTCCGTTCGGGTCGGGTCGGAGGACTTGCCCCGGAAAGACTCTGGGTTTGACCACTGCAACCTTCTGGGTGGCCAGGCTCTTGCACGAGTTTGAATGGTTACCGTCTGATGAAGCTAACGGGGTTGATCTAACGGAGGTGCTTAGGCTCTCGTGTGAAATGGCTAACCCCCTCAATGTTAAGGTTCGCCCTAGGCGTGGATTAAGCACTTAG 1602 0.5424 MTTHIDNLWVLALASKCTQENIAWSLLIMVSLWLTMTLFYWSHPGGPAWGKYHSTWRKNTNNLNHVSDNNKMIPGPKGYPILGSMRLMASLAHHRIAAAAKACNATRLMAFSLGDTRVIVTCHPDVAKEILTSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKASEFQRAQIAVQLTDSFRNRHAGFCVRQALKKASLNHMMWSVFGQRYNLDETNTGMEELSRLVEQGYDLLGTLNWGDHIPFLRDFDLQKIRFICSKLVPKVNRFVGSIIADHQADITQTNRDFVHVLLSLEGPDKLSHSDMIAVLWEMIFRGTDTVAVLIEWILARMVLHPEVQRKVQQELDAVVGSRVLTEEDVAATVYLPAVVKEVLRVHPPGPLLSWARLAITDTTIDGYHVPAGTTAMVNMWAIGRDPSVWVDPLQFKPERFLNGESEFSVFGSDLRLAPFGSGRRTCPGKTLGLTTATFWVARLLHEFEWLPSDEANGVDLTEVLRLSCEMANPLNVKVRPRRGLST 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00542 533 Pfam Cytochrome P450 74 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g00542 533 PANTHER CYTOCHROME P450 78A6 1 530 - -
Cca11g00542 533 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g00542 533 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g00542 533 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g00542 533 PRINTS E-class P450 group I signature 383 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g00542 533 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g00542 533 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g00542 533 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g00542 533 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g00542 533 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g00542 533 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g00542 533 Gene3D Cytochrome P450 64 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g00542 533 SUPERFAMILY Cytochrome P450 73 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca11g00542 533 PANTHER CYTOCHROME P450 78A7-RELATED 1 530 - -
Cca11g00542 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00542 Cca-Chr11 8279699 8282212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00542 1 529 Cytochrome P450 AT2G46660 64.684 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00542 K20619 - gmx:100798388 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00542 11 8279699 8282212 Cca11g00542 11 8279699 8282212 ECH